“…There was a clear clustering in the general proteome of AD (red symbols) vs. control (blue), p = 0.0023 (Figure 2). The top 10 proteins with the most differences in level between AD and control (excluding keratin which is a contaminant) included the previously well-studied inflammatory marker, glial fibrillary protein (GFAP) (Laurent et al, 2018), and several markers of neurodegeneration; neurofilament light polypeptide (NfL), microtubule-associated protein-2 (MAP2), spectrin βchain and β-chain, and β-synuclein (Yan et al, 2012;Bacioglu et al, 2016;Halbgebauer et al, 2020). Although not largely studied in AD, malate dehydrogenase expression has been explored in different brain regions of AD previously (Zahid et al, 2014), thus we selected CKB, Hsc71, and 14-3-3-γ for downstream analyses since, to our knowledge, these proteins have been less studied in AD human brain tissue.…”