The present investigation reports the design and synthesis of three series of benzoylthioureido derivatives bearing either benzenesulfonamide
7a–f
, benzoic acid
8a–f
or ethylbenzoate
9a–f
moieties. The synthesised compounds were screened for their carbonic anhydrase inhibitory activity (CAI) against four isoforms hCA I, II, IX, and XII. Compounds
7a, 7b, 7c
, and
7f
exhibited a potent inhibitory activity towards hCAI (
K
i
s = 58.20, 56.30, 33.00, and 43.00 nM), respectively compared to acetazolamide
(AAZ)
and SLC-0111 (
K
i
s = 250.00 and 5080.00 nM). Compounds
7a, 7b, 7c, 7e
, and
7f
elicited selectivity over h CA II (
K
i
s = 2.50, 2.10, 56.60,39.60 and 39.00 nM) respectively, relative to
AAZ
and SLC-0111(
K
i
s = 12.10 and 960.00 nM). Also, compounds
7c
,
7f,
and
9e
displayed selectivity against the tumour-associated isoform hCA IX (
K
i
s = 31.20, 30.00 and 29.00 nM) respectively, compared to
AAZ
and SLC-0111 (
K
i
s = 25.70 and 45.00 nM). Additionally, compounds
8a
and
8f
revealed a moderate to superior selectivity towards hCAXII (
K
i
s = 17.00 and 11.00 nM) relative to
AAZ
and SLC-0111(
K
i
s = 5.70 and 45.00 nM). Molecular docking and ADME prediction studies were performed on the most active compounds to shed light on their interaction with the hot spots of the active site of CA isoforms, in addition to prediction of their pharmacokinetic and physicochemical properties.