Materials and Methods Results Discussion Acknowledgements 31 Literature Cited 31 Chapter 3. Genetic diversity and pathogenicity of Brazilian isolates of 43 Ceratocystis fimbriata Abstract 43 Materials and Methods 46 Results 53 Discussion 60 Acknowledgements 64 Literature Cited 64 Chapter 4. Conclusions 86 References 89 Acknowledgments 101 1 Chapter 1. Introduction Thesis OrganizationThis thesis consists of four chapters: an introduction and literature review (Ch. 1); two papers for journal publication (Ch. 2-3); and a general discussion and conclusion (Ch. 4).References cited in the introduction, literature review, and conclusions are at the end of the thesis. Literature cited for chapters 2-3 are at the end of the respective chapters.
General IntroductionCeratocystis fimbriata Ellis &Halsted is a complex of many cryptic species known to be pathogenic to many economically important plants throughout the world. This fungus serves as a great model to investigate the definition of a species because of its unique biology, wide host range, and economic importance. The definition of a species has been and will continue to be a debatable issue. The species definition that will be used in these studies is a phylogenetic species concept incorporating population biology, lineages, and phenotypic characteristics (31). A fungus species is "the smallest aggregation of populations with a common lineage that ,share unique, diagnostic phenotypic characters," (31, page 19).Phylogenetic analyses of C. fimbriata indicate that isolates are separated into three geographical Glades centered in North America, Latin America, and Asia (27). Within the Latin American Glade, three distinct lineages are associated with three hosts: Platanus spp., Theobroma cacao, and Ipomoea batatas (6). There are many other hosts of the Latin American Glade, most of which are found infected in Brazil. Five of these hosts, all exotic to Brazil, include Gmelina arborea, Eucalyptus spp., Mangifera indica, Ficus carica, and Colocasia esculenta.There is little morphological variation within the Latin American Glade of Ceratocystis fimbriata, but host specialization may serve as a phenotypic character to diagnose species. Numerous studies have shown some isolates of C. fimbriata are uniquely pathogenic to their respective hosts. Such host specialization has been found for isolates from I. batatas, Platanus spp., T. cacao, G. arborea and Eucalyptus spp. (6). This thesis examines isolates from five economically important crops in Brazil: G. arborea, Eucalyptus spp., M. indica, F. carica, and Colocasia esculenta. To test the hypothesis that Brazilian isolates from these f ve exotic hosts are distinct species, two objectives were examined: i) compare the pathogenicity and phylogenetics of Araceae isolates of Ceratocystis fimbriata from around the world, including Colocasia esculenta isolates from Brazil; and ii) determine if host specialization and intersterility exists among isolates from the five exotic hosts of Brazil. Literature Review Ceratocystis fimbriata Ell...