Background
Rodents are important reservoirs for zoonotic vector-borne agents. Thus, the distribution of rodents and their vicinity to humans and companion animals may have an important impact on human and animal health. However, the reservoir potential of some rodent genera, e.g.
Microtus
, has not yet been precisely examined concerning tick-borne pathogens in Central Europe. Therefore, we examined small mammals from Germany and the Czech Republic for the following vector-borne pathogens:
Babesia
spp.,
Bartonella
spp.,
Anaplasma phagocytophilum
, “
Candidatus
Neoehrlichia mikurensis” (CNM) and
Coxiella burnetii
. Spleen DNA from 321 small mammals belonging to four genera,
Myodes
(
n
= 78),
Apodemus
(
n
= 56),
Microtus
(
n
= 149),
Sorex
(
n
= 38), collected during 2014 in Germany and the Czech Republic were available for this study. DNA samples were examined for the presence of
Babesia
and
Bartonella
DNA by conventional PCR targeting the
18S
rRNA gene and the 16S–23S rRNA intergenic spacer region, respectively. For the detection of CNM,
A. phagocytophilum
and
C. burnetii
real-time PCR assays were performed.
Results
Bartonella
spp. DNA was detected in 216 specimens (67.3%) with 102/174 (58.6%) positive in Germany and 114/147 (77.6%) in the Czech Republic. The prevalence in each genus was 44.9% for
Myodes
, 63.2% for
Sorex
, 77.2% for
Microtus
and 75% for
Apodemus.
Four
Bartonella
species, i.e.
Bartonella
sp. N40,
B. grahamii
,
B. taylorii
and
B. doshiae
, as well as uncultured bartonellae, were detected. The
Bartonella
species diversity was higher in rodents than in shrews. In total, 27/321 (8.4%) small mammals were positive for CNM and 3/321 (0.9%) for
A. phagocytophilum
(
S. coronatus
and
M. glareolus
). All samples were negative for
Babesia
spp. and
Coxiella
spp.
Conclusions
While the detected high prevalence for
Bartonella
in
Apodemus
and
Myodes
spp. is confirmatory with previous findings, the prevalence in
Microtus
...