Clathrate
hydrates are nonstoichiometric crystalline inclusion
compounds. Water acts as a “host lattice” and traps
small guest molecules in stable cavities. One example, methane hydrates,
are especially prevalent in situ at the seafloor.
Although microorganism-produced proteins and polypeptides, including
marine methylotroph porin proteins, can accelerate methane hydrate
formation under conditions simulating their natural occurrence at
the seafloor, the role that particular peptide sequences play in biocatalytic
hydrate kinetics enhancement is unclear, especially the underlying
molecular-level mechanisms. Here, we reveal the peptide-focused regulation
of microorganisms’ role in managing marine hydrates via an
approximation mechanism of enzymatic catalysis accelerating hydrate
formation. Aside from control of hydrate kinetics per se, we speculate that this peptide-centric mechanistic understanding
could lead to a re-evaluation of the extent and geological importance
of bioregulation of methane turnover in the biosphere.