AutoMorFi: Automated Whole-image Morphometry in Fiji/ImageJ for Diverse Image Analysis Needs
Ouzéna Bouadi,
Chenkai Yao,
Jason Zeng
et al.
Abstract:Running on the highly popular and accessible ImageJ/Fiji platform for biological image analysis, we have established AutoMorFi as a streamlined interface for automated whole-image morphometric analysis that generates at least 47 measurements per cell or object in under 1 minute. We performed multiple validated cluster analyses on nonredundant morphometric parameters derived from AutoMorFi for various cell types, objects and organisms. We used images of rodent macrophages, human postmortem brain tissues from mu… Show more
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