Abstract:CH4 emission in the Arctic has large uncertainty
due
to the lack of mechanistic understanding of the processes. CH4 oxidation in Arctic soil plays a critical role in the process,
whereby removal of up to 90% of CH4 produced in soils by
methanotrophs can occur before it reaches the atmosphere. Previous
studies have reported on the importance of rising temperatures in
CH4 oxidation, but because the Arctic is typically an N-limited
system, fewer studies on the effects of inorganic nitrogen (N) have
been reported.… Show more
“…However, no such enrichment of 13 C-labeled metabolites was observed in the red soil, where methanotrophs were predominantly composed of (over 90%) type II methanotrophs. Previous studies have reported that type II methanotrophs, including Methylocystis and Methylosinus , were less tolerant to high N concentration 47 , 48 . Therefore, the effects of NO 3 − on methanotrophs may exert confounding effects on the coupling between CH 4 oxidation and denitrification.…”
Paddy fields are hotspots of microbial denitrification, which is typically linked to the oxidation of electron donors such as methane (CH4) under anoxic and hypoxic conditions. While several anaerobic methanotrophs can facilitate denitrification intracellularly, whether and how aerobic CH4 oxidation couples with denitrification in hypoxic paddy fields remains virtually unknown. Here we combine a ~3300 km field study across main rice-producing areas of China and 13CH4-DNA-stable isotope probing (SIP) experiments to investigate the role of soil aerobic CH4 oxidation in supporting denitrification. Our results reveal positive relationships between CH4 oxidation and denitrification activities and genes across various climatic regions. Microcosm experiments confirm that CH4 and methanotroph addition promote gene expression involved in denitrification and increase nitrous oxide emissions. Moreover, 13CH4-DNA-SIP analyses identify over 70 phylotypes harboring genes associated with denitrification and assimilating 13C, which are mostly belonged to Rubrivivax, Magnetospirillum, and Bradyrhizobium. Combined analyses of 13C-metagenome-assembled genomes and 13C-metabolomics highlight the importance of intermediates such as acetate, propionate and lactate, released during aerobic CH4 oxidation, for the coupling of CH4 oxidation with denitrification. Our work identifies key microbial taxa and pathways driving coupled aerobic CH4 oxidation and denitrification, with important implications for nitrogen management and greenhouse gas regulation in agroecosystems.
“…However, no such enrichment of 13 C-labeled metabolites was observed in the red soil, where methanotrophs were predominantly composed of (over 90%) type II methanotrophs. Previous studies have reported that type II methanotrophs, including Methylocystis and Methylosinus , were less tolerant to high N concentration 47 , 48 . Therefore, the effects of NO 3 − on methanotrophs may exert confounding effects on the coupling between CH 4 oxidation and denitrification.…”
Paddy fields are hotspots of microbial denitrification, which is typically linked to the oxidation of electron donors such as methane (CH4) under anoxic and hypoxic conditions. While several anaerobic methanotrophs can facilitate denitrification intracellularly, whether and how aerobic CH4 oxidation couples with denitrification in hypoxic paddy fields remains virtually unknown. Here we combine a ~3300 km field study across main rice-producing areas of China and 13CH4-DNA-stable isotope probing (SIP) experiments to investigate the role of soil aerobic CH4 oxidation in supporting denitrification. Our results reveal positive relationships between CH4 oxidation and denitrification activities and genes across various climatic regions. Microcosm experiments confirm that CH4 and methanotroph addition promote gene expression involved in denitrification and increase nitrous oxide emissions. Moreover, 13CH4-DNA-SIP analyses identify over 70 phylotypes harboring genes associated with denitrification and assimilating 13C, which are mostly belonged to Rubrivivax, Magnetospirillum, and Bradyrhizobium. Combined analyses of 13C-metagenome-assembled genomes and 13C-metabolomics highlight the importance of intermediates such as acetate, propionate and lactate, released during aerobic CH4 oxidation, for the coupling of CH4 oxidation with denitrification. Our work identifies key microbial taxa and pathways driving coupled aerobic CH4 oxidation and denitrification, with important implications for nitrogen management and greenhouse gas regulation in agroecosystems.
“…Natural gas has been widely used as an energy source in vehicles or power plants. [1][2][3] Catalytic methane (CH 4 ) as a greenhouse gas is the main component of natural gas, which causes serious harm to the environment. 4,5 In response to the premise that the country strongly advocates carbon neutrality, it is urgent to effectively eliminate CH 4 emission.…”
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