Aims The present study assessed the effect of Sigma-1 receptor (S1R) stimulation on autonomic nerve dysfunction and atrial fibrillation susceptibility in rat depression models. Methods and Results Male rats were randomly divided into four treatment groups for four weeks: saline (CTL), saline+ intragastric administration of SA4503 (agonist of the S1R, CTS), chronic unpredictable mild stress (CUMS) to produce depression(MDD), and CUMS+ intragastric administration of SA4503 (MDS). After 4 weeks, depression-like behaviors, such as sucrose preference, body weight, and immobility during forced swimming improved in the MDS group. Compared with CTL, MDD showed augmented sympathetic activity, reduced parasympathetic activity, decreased heart rate variability, and significantly lowered S1R expression in the atrium and in hippocampal tissues (all P<0.01). However, the MDS group showed mitigation of most of the above alterations and improved electrical remodeling (all P<0.01). Furthermore, the MDS group showed shortened activation latencies, increases in the effective refractory period, and lower frequency of AF incidence duration and fibrosis compared to MDD (all P<0.01). Conclusions The results indicate that S1R stimulation reduces sympathetic activity and atrial fibrillation susceptibility by improving depressive behaviours, modulating cardiac autonomic nerve balance, lightening nerve remodeling, and up-regulating S1R expression.