2008
DOI: 10.1088/0253-6102/49/2/57
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Ashkin–Teller Formalism for Elastic Response of DNA Molecule to External Force and Torque

Abstract: We propose an Ashkin–Teller-like model for elastic response of DNA molecule to external force and torque. The base-stacking interaction is described in a simple and uniform way. We obtain the phase diagram of dsDNA, and in particular, the transition from B form to the S state induced by stretching and twisting. The elastic response of the ssDNA is presented also in a unified formalism. The close relation of dsDNA molecule structure with elastic response is shown clearly. The calculated folding angle of the dsD… Show more

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Cited by 28 publications
(12 citation statements)
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“…The second term can now be expanded in inverse powers of the large local energy scale g i or K i . In the strong-coupling regime, ǫ ≫ 1, the strongdisorder renormalization group is controlled by the first two lines of (17). It does not depend on the N -products η i which are slaved to the σ i and τ i via the large brackets in the third and forth lines of (17).…”
Section: B Variable Transformation For N =mentioning
confidence: 99%
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“…The second term can now be expanded in inverse powers of the large local energy scale g i or K i . In the strong-coupling regime, ǫ ≫ 1, the strongdisorder renormalization group is controlled by the first two lines of (17). It does not depend on the N -products η i which are slaved to the σ i and τ i via the large brackets in the third and forth lines of (17).…”
Section: B Variable Transformation For N =mentioning
confidence: 99%
“…The strength of the inter-color coupling can be characterized by the ratios ǫ h,i = g i /h i and ǫ J,i = K i /J i . In addition to its fundamental interest, the Ashkin-Teller model has been applied to absorbed atoms on surfaces [14], organic magnets, current loops in high-temperature superconductors [15,16] as well as the elastic response of DNA molecules [17]. The quantum Ashkin-Teller chain (1) is invariant under the dual-…”
Section: N -Color Quantum Ashkin-teller Chainmentioning
confidence: 99%
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“…Recent researches of this Ising model and its phase diagrams with four spin interaction and some of its applications have been done [4][5][6][7][8].…”
Section: Introductionmentioning
confidence: 99%
“…Besides its fundamental interest, different versions of the Ashkin-Teller model have been used to describe absorbed atoms on surfaces 30 , organic magnets, current loops in hightemperature superconductors 31,32 , as well as the elastic response of DNA molecules. 33 In the clean quantum Ashkin-Teller chain, the interactions and coupling strengths are uniform in space, J i ≡ J, K i ≡ K, h i ≡ h, and g i ≡ g. The bulk phases of this model are easily understood qualitatively. In the weakcoupling regime ǫ J , ǫ h ≪ 1, the system is in the paramagnetic phase if the transverse fields are larger than the interactions, h ≫ J.…”
Section: A Quantum Ashkin-teller Chainmentioning
confidence: 98%