f Artemisinins induce drug metabolism through the activation of the pregnane X receptor (PXR) in vitro. Here, we report the resequencing and genotyping of PXR variants in 75 Vietnamese individuals previously characterized for CYP3A enzyme activity after artemisinin exposure. We identified a total of 31 PXR variants, including 5 novel single nucleotide polymorphisms (SNPs), and we identified significantly different allele frequencies relative to other ethnic groups. A trend of significance was observed between the level of CYP3A4 induction by artemisinin and two PXR variants, the 8118C¡T (Y328Y) and 10719A¡G variants.A rtemisinin combination therapy (ACT) is an integral part of the global management of malaria (7). In this treatment strategy, an artemisinin-related compound with a short half-life (t 1/2 ; ϳ0.25 to 4 h) is combined with a more slowly eliminated antimalarial to reduce recrudescence and to slow the development of resistance (24). Currently, several ACT formulations, including artesunate-mefloquine, artemether-lumefantrine, and artesunate-amodiaquine, are used (27), and a second generation of ACTs is being scheduled for global launch. These ACTs include dihydroartemisinin-piperaquine (5) and artesunate-pyronaridine (30).In vitro studies indicate that artemisinin, arteether, and artemether are effective ligands of the pregnane X receptor (PXR) (4), a nuclear receptor and a key player in the regulation of the expression of proteins involved in drug metabolism (e.g., cytochrome P450s [CYP450s]) and transport (e.g., ABC transporters) (6). Variability in the expression and function of these proteins may lead to alterations in the pharmacokinetics of artemisinin derivatives, possibly resulting in pharmacodynamic changes and subsequent clinical consequences such as side effects (14).A previously performed in vivo study including 75 Vietnamese subjects showed a significant interindividual variation in the degree of artemisinin-driven induction of several CYP450 enzymes, including CYP3As, the genes which are canonical targets of PXR (1). In the present work, we built upon this study by hypothesizing that specific single nucleotide polymorphisms (SNPs) in PXR might explain the observed interindividual variability in the level of CYP3A induction. For this purpose, the PXR gene was fully resequenced in all individuals who participated in the study mentioned above, with a focus on the open reading frame (ORF) (mutations in which could lead to proteins with altered activities), intron-exon boundaries (mutations in which could lead to disturbances in the well-documented alternative splicing of PXR), and the proximal promoter (mutations in which could modulate basal expression). Additionally, known variants with putative functional consequences located in introns and other regions (e.g., the 3= region) were genotyped by using matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) technology. Primers and amplification conditions are listed in Table S1 in the supplemental material....