Abstract:Mycotoxins are a large type of secondary metabolites produced by fungi that pose a great hazard to and cause toxic reactions in humans and animals. A majority of countries and regulators, such as the European Union, have established a series of requirements for their use, and they have also set maximum tolerance levels. The development of high sensitivity and a specific analytical platform for mycotoxins is much in demand to address new challenges for food safety worldwide. Due to the superiority of simple, ra… Show more
“…In general, methods allowing aptamer–target binding occurring free in solution, as the MST assay described herein, are the preferred ones because they remove any contribution from matrix binding responsible for reducing aptamer functionality. On the other hand, colorimetric assays, like the MBs one, are widely applied in quantitative detection of mycotoxins, especially in the real-sample applications [ 29 , 30 , 32 ].…”
Section: Resultsmentioning
confidence: 99%
“…To date, these aptamers have been integrated into several applications for mycotoxin analysis, including colorimetric, electrochemical, electrochemiluminescence and fluorescent biosensors, enzyme-linked assays and affinity chromatography approaches. Extensive reviews have been recently published covering the recent developments of aptamer-based biosensors for the detection of mycotoxins [ 29 , 30 , 31 , 32 ].…”
Aptamers are single-stranded oligonucleotides selected by SELEX (Systematic Evolution of Ligands by EXponential Enrichment) able to discriminate target molecules with high affinity and specificity, even in the case of very closely related structures. Aptamers have been produced for several targets including small molecules like mycotoxins; however, the high affinity for their respective target molecules is a critical requirement. In the last decade, the screening through computational methods of aptamers for their affinity against specific targets has greatly increased and is becoming a commonly used procedure due to its convenience and low costs. This paper describes an in-silico approach for rapid screening of ten ssDNA aptamer sequences against fumonisin B1 (FB1, n = 3), aflatoxin B1 (AFB1, n = 2) and ochratoxin A (OTA, n = 5). Theoretical results were compared with those obtained by testing the same aptamers by fluorescent microscale thermophoresis and by magnetic beads assay for their binding affinity (KD) revealing a good agreement.
“…In general, methods allowing aptamer–target binding occurring free in solution, as the MST assay described herein, are the preferred ones because they remove any contribution from matrix binding responsible for reducing aptamer functionality. On the other hand, colorimetric assays, like the MBs one, are widely applied in quantitative detection of mycotoxins, especially in the real-sample applications [ 29 , 30 , 32 ].…”
Section: Resultsmentioning
confidence: 99%
“…To date, these aptamers have been integrated into several applications for mycotoxin analysis, including colorimetric, electrochemical, electrochemiluminescence and fluorescent biosensors, enzyme-linked assays and affinity chromatography approaches. Extensive reviews have been recently published covering the recent developments of aptamer-based biosensors for the detection of mycotoxins [ 29 , 30 , 31 , 32 ].…”
Aptamers are single-stranded oligonucleotides selected by SELEX (Systematic Evolution of Ligands by EXponential Enrichment) able to discriminate target molecules with high affinity and specificity, even in the case of very closely related structures. Aptamers have been produced for several targets including small molecules like mycotoxins; however, the high affinity for their respective target molecules is a critical requirement. In the last decade, the screening through computational methods of aptamers for their affinity against specific targets has greatly increased and is becoming a commonly used procedure due to its convenience and low costs. This paper describes an in-silico approach for rapid screening of ten ssDNA aptamer sequences against fumonisin B1 (FB1, n = 3), aflatoxin B1 (AFB1, n = 2) and ochratoxin A (OTA, n = 5). Theoretical results were compared with those obtained by testing the same aptamers by fluorescent microscale thermophoresis and by magnetic beads assay for their binding affinity (KD) revealing a good agreement.
“…DNA aptamers are also single‐stranded and can selectively bind to a diverse range of analytes to form rigid binding complexes [29–31] . Simple and sensitive detection of aptamer binding is desirable [32–35] . Since aptamer binding can fold DNA and hide the bases, [29] the adsorption of aptamer/target complexes to AuNPs is also expected to be slow.…”
Taking advantage of the adsorption of single‐stranded DNA oligonucleotides by gold nanoparticles (AuNPs) and the protection effect of the adsorbed DNA against salt‐induced aggregation of AuNPs, a label‐free colorimetric sensor for the detection of DNA was reported in 2004. Since then, the range of target molecules has extended from complementary nucleic acids to metal ions and small molecules by using aptamers. In the presence of target molecules, a blue color arising from aggregated AuNPs is expected. However, these sensors only considered aptamer binding to its target, and the adsorption of aptamers by AuNPs, while the target/AuNP interactions were ignored. We recently found that target adsorption can often dominate the system. In this Review, we list literature examples of using this label‐free strategy for sensing aptamer targets. Seven target analytes are discussed in detail. For As(III), dopamine, melamine, kanamycin, adenosine, and ATP, target adsorption dominated, and the same color change was observed even with non‐aptamer sequences. Only in the case of K+ detection, did the effect of specific aptamer binding dominate, attributable to weak K+/AuNP interactions. These examples call for a careful evaluation of target adsorption and the use of non‐aptamer control sequences in validating these sensors.
“…Aptamers are short, single-stranded oligonucleotides (DNA or RNA, usually 20 to 110 nucleotides in length) capable of binding to a specific molecule with an affinity that can be of the same order of magnitude as that of antibodies. An aptamer specific to a target is identified in vitro by an iterative selection process called SELEX (systematic evolution of ligands by exponential enrichment) performed on an initial mixture of a very high number of different oligonucleotides [ 161 , 162 , 163 ]. Most of the already identified specific oligonucleotide sequences are directed against large molecules such as peptides, proteins, nucleic acids and even bacteria, but also for a significant number of small molecules such as drugs, organic pollutants, and even inorganic ions [ 163 , 164 , 165 ].…”
Section: Oligosorbentsmentioning
confidence: 99%
“…Moreover, modifications can be introduced during their chemical synthesis to improve their stability or to facilitate their immobilization [ 166 ]. If their use in the field of biosensors has been widely described as still recently for mycotoxins [ 161 , 167 ] and marine (bio)toxins [ 8 , 9 ], the development of OSs for their use as selective extraction sorbents is quite recent but seems to be a very promising approach [ 168 ]. As illustrated by the works summarized in Table 4 , the development of OSs for toxins mainly concerns two classes of mycotoxins, OTA and aflatoxins.…”
The evolution of instrumentation in terms of separation and detection allowed a real improvement of the sensitivity and analysis time. However, the analysis of ultra-traces of toxins in complex samples requires often a step of purification and even preconcentration before their chromatographic analysis. Therefore, immunoaffinity sorbents based on specific antibodies thus providing a molecular recognition mechanism appear as powerful tools for the selective extraction of a target molecule and its structural analogs to obtain more reliable and sensitive quantitative analysis in environmental, food or biological matrices. This review focuses on immunosorbents that have proven their efficiency in selectively extracting various types of toxins of various sizes (from small mycotoxins to large proteins) and physicochemical properties. Immunosorbents are now commercially available, and their use has been validated for numerous applications. The wide variety of samples to be analyzed, as well as extraction conditions and their impact on extraction yields, is discussed. In addition, their potential for purification and thus suppression of matrix effects, responsible for quantification problems especially in mass spectrometry, is presented. Due to their similar properties, molecularly imprinted polymers and aptamer-based sorbents that appear to be an interesting alternative to antibodies are also briefly addressed by comparing their potential with that of immunosorbents.
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