Objective: The aim of this study was to investigate homocysteine and methylmalonic acid levels as markers of functional cobalamin and folate status in pregnant Nepali women. Design: Cross-sectional study. Setting: Patan Hospital, Kathmandu, Nepal. Subjects: A sub-sample (n ¼ 382) of all pregnant women (n ¼ 2856) coming for their first antenatal visit in a 12 month period, 1994 -1995. The selection of the sub-sample was based on maternal haematocrit values, categorised into three groups: severely, moderately and non-anaemic women. As serum levels of total homocysteine (s-tHcy) and methylmalonic acid (s-MMA) were similar in the three groups, pooled data are presented. Women who had already received micronutrient supplementation (n ¼ 54) were excluded. The remaining women (n ¼ 328) were included in the statistical analysis. Results: Overall mean values ( AE s.d.) of s-tHcy and s-MMA were 9.5 ( AE 4.2) mmol=l and 0.39 ( AE 0.32) mmol=l, respectively. Elevated s-tHcy (>7.5 mmol=l) was found in 68% of the women, while 61% had elevated s-MMA (>0.26 mmol=l). Low s-cobalamin values (<150 pmol=l) were observed in 49% of the women, while only 7% had low s-folate values ( 4.5 nmol=l). s-tHcy was significantly correlated with s-MMA (r ¼ 0.28, P<0.001), s-cobalamin (r ¼ 70.30, P<0.001) and s-folate (r ¼ 70.24, P<0.001). s-MMA was significantly associated with s-cobalamin (r ¼ 70.40, P<0.001), but not with s-folate. Conclusions: Functional cobalamin deficiency was very common in the study population, while functional folate deficiency was rather uncommon. We suggest considering cobalamin supplementation to pregnant Nepali women. Sponsorship: The Norwegian Research Council and the Norwegian Universities Committee for Development, Research and Education.