Ethylene is a gaseous hormone important for adaptation and survival in plants. To further understand the signaling and regulatory network of ethylene, we used a phenotype-based screening strategy to identify chemical compounds interfering with the ethylene response in Arabidopsis thaliana. By screening a collection of 10,000 structurally diverse small molecules, we identified compounds suppressing the constitutive triple response phenotype in the ethylene overproducer mutant eto1-4. The compounds reduced the expression of a reporter gene responsive to ethylene and the otherwise elevated level of ethylene in eto1-4. Structure and function analysis revealed that the compounds contained a quinazolinone backbone. Further studies with genetic mutants and transgenic plants involved in the ethylene pathway showed that the compounds inhibited ethylene biosynthesis at the step of converting S-adenosylmethionine to 1-aminocyclopropane-1-carboxylic acid (ACC) by ACC synthase. Biochemical studies with in vitro activity assay and enzyme kinetics analysis indicated that a representative compound was an uncompetitive inhibitor of ACC synthase. Finally, global gene expression profiling uncovered a significant number of genes that were co-regulated by the compounds and aminoethoxyvinylglycine, a potent inhibitor of ACC synthase. The use of chemical screening is feasible in identifying small molecules modulating the ethylene response in Arabidopsis seedlings. The discovery of such chemical compounds will be useful in ethylene research and can offer potentially useful agrochemicals for quality improvement in post-harvest agriculture.Ethylene is an important gaseous phytohormone regulating plant growth and development in processes such as seed germination, root development, leaf and flower senescence, and fruit ripening and responds to a variety of stresses (1-4). Because of its versatile functions, ethylene has a critical role in adaptation and survival in plants. In the presence of ethylene, etiolated seedlings display photomorphogenesis, called the triple response phenotype, an exaggerated curvature of the apical hook, radial swelling of the hypocotyl, and shortening of the hypocotyl and root (5). The triple response phenotype has been successfully used to identify mutants defective in ethylene biosynthesis or response in Arabidopsis thaliana (5-8). Further studies of the ethylene mutants revealed the genetic hierarchy of key components in ethylene biosynthesis and signal transduction in Arabidopsis (3, 9). Ethylene signaling is initiated by the interaction between the ethylene ligand and its receptors localized in the endoplasmic reticulum (ER) 2 membrane (10, 11). Binding of ethylene to the receptors inactivates a negative regulator, CTR1, that constitutively represses a positive regulator, EIN2 (12, 13). Ethylene receptors activate CTR1 to suppress EIN2 in the absence of ethylene and therefore function as negative regulators of the ethylene response (14, 15). A functional interaction among the ethylene receptors, CTR1 and EIN...