2003
DOI: 10.1021/jm034093h
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Antimalarial Drug Quinacrine Binds to C-Terminal Helix of Cellular Prion Protein

Abstract: Using NMR spectroscopy we show that the cellular prion protein constitutes a target for binding of various acridine and phenothiazine derivatives. We unambiguously map the quinacrine binding site of recombinant human prion protein to residues Tyr225, Tyr226, and Gln227 of helix alpha3, which is located near the "protein X" epitope. The millimolar dissociation constant of the complex suggests that in vivo inhibition of prion propagation occurs after 10000-fold concentration of quinacrine within endolysosomes.

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Cited by 95 publications
(80 citation statements)
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“…The IC 50 value obtained of 1.6 AE 0.4 μM is in good agreement with the K d values obtained by ITC, induced CD, and AUC, suggesting the most likely mode of action of Fe(III)-TMPyP in cells is inhibiting prion propagation by binding to the ground state of PrP C and preventing its conversion to PrP Sc . This contrasts with quinacrine, which is believed to concentrate in specific organelles (44) and where the cell curing is around 100,000-fold higher than the K d calculated by NMR (43). The increased cell potency of Fe(III)-TMPyP may be related to its tendency to locate near anionic lipids (46) or may suggest that not all PrP needs to be stabilized to cure prion-infected cells, allowing curing below the K d for the compound.…”
Section: Discussionmentioning
confidence: 88%
“…The IC 50 value obtained of 1.6 AE 0.4 μM is in good agreement with the K d values obtained by ITC, induced CD, and AUC, suggesting the most likely mode of action of Fe(III)-TMPyP in cells is inhibiting prion propagation by binding to the ground state of PrP C and preventing its conversion to PrP Sc . This contrasts with quinacrine, which is believed to concentrate in specific organelles (44) and where the cell curing is around 100,000-fold higher than the K d calculated by NMR (43). The increased cell potency of Fe(III)-TMPyP may be related to its tendency to locate near anionic lipids (46) or may suggest that not all PrP needs to be stabilized to cure prion-infected cells, allowing curing below the K d for the compound.…”
Section: Discussionmentioning
confidence: 88%
“…First, the effects of "antiprion" compounds are clearly species/strain-dependent, in that drugs found to restrain prions in one situation may improve replicative ability in another. Based on initial reports of quinacrine's effects on mouse prion propagation in cell culture, a plethora of studies were designed to discern the mechanism of its presumed antiprion effects (19,20,(29)(30)(31)(38)(39)(40)(41)(42)(43)(44)(45), to assess its pharmacokinetics (21,36,42,46) and to derive similar compounds with improved antiprion efficacy (18,20,(47)(48)(49)(50)(51)(52)(53)(54)(55)(56)(57)(58)(59). These studies continue to this day, despite multiple failed clinical studies in patients with human prion diseases (10)(11)(12)(13)(14)(15).…”
Section: Discussionmentioning
confidence: 99%
“…In the first set of entries (1-15) the synthesized 9-chloroacridines were coupled with commercially available sidechain 9{1,9}, while in the second set of entries (16)(17)(18)(19)(20)(21)(22)(23)(24)(25)(26)(27)(28)(29)(30)(31), the commercially available 9-chloroacridine heterocycle 7{4,6} of quinacrine was coupled with the set of synthesized diamines. Yields and purities of the coupled products were highly variable.…”
Section: Proof-of-concept Librarymentioning
confidence: 99%
“…The latter two items were conveniently added in parallel via the Bohdan Resin Dispenser accessory. The block was simultaneously heated to 100 °C and agitated at 600 RPM using the Bohdan MiniBlock High Capacity Shaking and Washing Station for 2 h. RP-LCMS usually showed quantitative conversion to the 9-phenoxyacridine chemset (17). Next, diamines (9) were added (125 μL DMSO stock, 4 eq.)…”
Section: General Procedures For Parallel Reductive Amination and Nosylmentioning
confidence: 99%
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