“…Neutralization of the D85 anion by protonation (acid BR or BR600 (Fischer & Oesterhelt, 1979), pK a ca 3) or mutation of D85 to asparagine or threonine induce a red shift of the absorption maximum (l max ) of BR from 570 nm to around 600 nm (Marti et al, 1991;Turner et al, 1993;Tittor et al, 1994;Sasaki et al, 1995). Anion-dependent shifts of l max of the BR chromophore at low pH back to the original absorption maximum (Fischer & Oesterhelt, 1979;Drachev et al, 1989;Varo & Lanyi, 1989), resonance Raman experiments of the anion-bound form of BR (Diller et al, 1987) and alterations in the photo reaction dependent on anion concentration (Varo & Lanyi, 1989) suggested binding of chloride and other halides at a location close to the Schiff base and in the vicinity of D85. Mutants D85X, D85N/D212N and R82Q/D85N/D212N show red shifts and their absorption maxima similar to those observed with protonated D85.…”