AncestryGrapher toolkit: Python command-line pipelines to visualize global– and local– ancestry inferences from the RFMix2 software
Alessandro Lisi,
Michael C. Campbell
Abstract:Summary: Admixture is a fundamental process that has shaped patterns of genetic variation and the risk for disease in human populations. Here, we introduce the AncestryGrapher toolkit for visualizing inferred global– and local– ancestry by the RFMix v.2 software. Currently, there is no straightforward method to summarize population ancestry results from RFMix analysis. Results: To demonstrate the utility of our method, we applied the AncestryGrapher toolkit to the output files of RFMix v.2 to visualize the glo… Show more
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