2015
DOI: 10.1038/srep11036
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Analysis of Wnt signalling dynamics during colon crypt development in 3D culture

Abstract: Many systems biology studies lack context-relevant data and as a consequence the predictive capabilities can be limited in developing targeted cancer therapeutics. Production of colon crypt in vitro is ideal for studying colon systems biology. This report presents the first production of, to our knowledge, physiologically-shaped, functional colon crypts in vitro (i.e. single crypts with cells expressing Mucin 2 and Chromogranin A). Time-lapsed monitoring of crypt formation revealed an increased frequency of si… Show more

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Cited by 14 publications
(18 citation statements)
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“…The detailed image acquisition and analysis procedures for acquiring images in 96‐well plates have been described previously (Hirokawa et al , ; Tan et al , ). In this experiment, 384‐well plates (Corning #3985) were used.…”
Section: Methodsmentioning
confidence: 99%
“…The detailed image acquisition and analysis procedures for acquiring images in 96‐well plates have been described previously (Hirokawa et al , ; Tan et al , ). In this experiment, 384‐well plates (Corning #3985) were used.…”
Section: Methodsmentioning
confidence: 99%
“…Intestinal crypt isolation was performed as previously described by Tan et al . 10 , with few modifications. In brief, the distal half of the colon from C57BL/6 WT mice, excluding the cecum and the most proximal portion, was harvested and transferred to a petri dish on ice; then, the sample was flushed with ice-cold phosphate-buffered saline (PBS) and cut open longitudinally.…”
Section: Methodsmentioning
confidence: 99%
“…One possible explanation for this extended stability is that with every medium exchange, culture debris is removed and the organoids in the microwells are in direct contact with fresh growth factors and other cytokines contained in the medium, whereas nutrients have to diffuse through the gel for organoids embedded in Matrigel domes and metabolic waste products are more likely to remain. [43] Alternatively, organoids grown in microwells may be exposed to higher and more equally distributed oxygen concentrations to facilitate growth and viability, as demonstrated previously for organoids in suspension cultures compared to ones grown embedded at different locations and different depths within dense gels. Okkelman et al [37] demonstrated that organoids randomly distributed within Matrigel domes are not equally exposed to oxygen, imposing differences between organoids located close to the surface and deeper in the matrix.…”
Section: Organoids In Microwells Show Lower Cell Death Ratesmentioning
confidence: 99%