2021
DOI: 10.48550/arxiv.2107.09188
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Analysis of Spatial and Spatiotemporal Anomalies Using Persistent Homology: Case Studies with COVID-19 Data

Abstract: We develop a method for analyzing spatiotemporal anomalies in geospatial data using topological data analysis (TDA). To do this, we use persistent homology (PH), a tool from TDA that allows one to algorithmically detect geometric voids in a data set and quantify the persistence of these voids. We construct an efficient filtered simplicial complex (FSC) such that the voids in our FSC are in one-to-one correspondence with the anomalies. Our approach goes beyond simply identifying anomalies; it also encodes infor… Show more

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Cited by 2 publications
(3 citation statements)
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“…Since its development, PH has been applied in a multitude of fields, such as the identification of cancer cells in medical imagery, e.g., [19,20], characterizing porous material, e.g., [21,22], collective behavior in biology, e.g., [23], and comparing musical pieces [24]. More recently, researchers have also realized the use of PH as an automatic detection tool for geospatial objects in the geosciences, e.g., [25,26], the social sciences, e.g., [27][28][29], and transportation [30]. We hypothesized that the PH analysis of satellite imagery can draw attention to surface features related to O&G wells.…”
Section: Introductionmentioning
confidence: 99%
“…Since its development, PH has been applied in a multitude of fields, such as the identification of cancer cells in medical imagery, e.g., [19,20], characterizing porous material, e.g., [21,22], collective behavior in biology, e.g., [23], and comparing musical pieces [24]. More recently, researchers have also realized the use of PH as an automatic detection tool for geospatial objects in the geosciences, e.g., [25,26], the social sciences, e.g., [27][28][29], and transportation [30]. We hypothesized that the PH analysis of satellite imagery can draw attention to surface features related to O&G wells.…”
Section: Introductionmentioning
confidence: 99%
“…Stolz et al [31] used PH to examine the geospatial distribution of voting results in the "Brexit" referendum. Hickok et al [21] used PH to study geospatial anomalies in COVID-19 case-rate data (see also [13]) and vaccination-rate data.…”
mentioning
confidence: 99%
“…The simplicial complex K i has the associated filtration-parameter value i. [This figure appeared originally in [21]. ]…”
mentioning
confidence: 99%