SummaryMice expressing the minor lymphocyte stimulation antigens, Mls-1 a, -2 a, or -3 ~, singly on the B10.BR background have been generated. Mls phenotypes correlate with the integration of mouse mammary tumor viruses (MTV) in the mouse genome. The open reading frames within the 3' long terminal repeats of the integrated MTVs 1, 3, 6, and 13 encode V~3-specific superantigens. Sequence data for these viral superantigens is presented, indicating that it is the COOH-terminal portion of the viral superantigen that interacts with the T cell receptor VB element.A number of murine aUoantigens have been described that, in combination with MHC class II products, stimulate T cells bearing particular V3 elements (1-8). These alloantigens have been termed superantigens (9). Mice expressing such superantigens delete thymocytes bearing reactive V3 elements during development in the thymus (10). This clonal elimination of thymocytes maintains self-tolerance by preventing mature self-reactive T cells from reaching the periphery.The analysis of peripheral expression ofT cells bearing particular V3 elements has recently facilitated the mapping of several of these superantigens to particular chromosomal locations. Woodland et al. (11,12) found no recombinants between the gene encoding a superantigen (Etc-1), which causes deletion of V/~11-and VB5.2-bearing T cells, and a mouse mammary tumor virus (MTV) 1 integrant (Mtv-9) on chromosome 12. In addition, the genes for several other endogenous mouse superantigens map to the same chromosomal regions as MTV integrants (4,13,14). In the past, however, some recombinants between the genetic locations of mouse endogenous superantigens and Mtvs had been reported in the AKXD and BXD recombinant inbred mice. Suspecting that these reported recombinants may have been mistyped, Frankel et al. (15) found perfect correlation between the expression of several superantigens and presence of particular MTV integrants in these mice. Thus, these investigators suggested that MTV integrants themselves code for the endogenous mouse superantigens. Independently, Dyson et al. (16) arrived at the same conclusion after mapping several ligands that delete Vf111 + T cells.Recently, we have shown that the infectious milk-borne MTV carried by C3H/HeJ mice codes for a superantigen that interacts with T cells bearing 18). Furthermore, transfection experiments have shown that it is the product of the open reading frame (ORF) within the 3' long terminal repeat (LTR) of the C3H MTV that confers the ability to interact with TCK in a V~-specific manner (18). have shown, using a transgenic model, that the OKF of the infectious MTV transmitted in the milk of GR mice also causes deletion of Vf114 § thymocytes. We have suggested the name viral superantigen (vSAG) for these ORF genes.In this study, we have used mice expressing Mls-1 a -2 a, or -3 a singly on the B10.BR background to demonstrate conclusively the correlation between the expression of these Mls phenotypes and the presence of , respectively. Transfection exp...