Analysis of genetic diversity in Croatian fig (<i>Ficus carica</i> L.) germplasm using SSR markers

Poljuha, Danijela; Kralj, Ines; Krapac, Marin; Klepo, Tatjana; Radunić, Mira; Strikić, Frane; Weber, Tim; Erċışlı, Sezai; Arbeiter, Alenka Baruca; Hladnik, Matjaž; Bandelj, Dunja

doi:10.17660/actahortic.2021.1310.6

Cited by 1 publication

(1 citation statement)

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“…There does not appear to be any consensus for a common list of SSRs that can be used in fig genotyping. Consequently, we compared 10 papers on fingerprinting of fig collections (Akin et al., 2021; Baraket et al., 2011; Boudchicha et al., 2018; Ergül et al., 2021; Ferrara et al., 2016; Knap et al., 2018; Marcotuli et al., 2019; Perez‐Jiménez et al., 2012; Poljiula et al., 2021; Rodolfi et al., 2018) and ranked 22 SSRs according to the frequency with which they had been adopted by different authors (Table 16). The top marker among those listed was the one that was most commonly used (8 out of 10 authors) and others were then ranked in descending order.…”

Section: Markers In Selected Species Of Fruit Cropmentioning

confidence: 99%

SSR‐based DNA fingerprinting of fruit crops

et al. 2023

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The DNA fingerprinting of fruit crops, based on DNA microsatellite markers that are considered to be the key markers for the molecular analysis of germplasm collections, is reviewed. Simple sequence repeats (SSRs) remain the markers of choice for fingerprinting in humans, animals, plants, and other living organisms. This review, that considers 44 fruit species, provides a set of markers that are suitable for profiling accessions and that should make the databases produced in different laboratories more comparable. Every effort has been made to select SSR markers that are robust and easily scorable considering that such analyses are sometimes used in legal cases. The review first describes the basic protocols, procedures, and methods of data analyses; it then describes the fingerprinting of individual species or groups of species, providing a set of SSR markers and appropriate guidance based on the revised literature and on the authors' experience.

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