The Cardiovirus genus of the family Picornaviridae includes two distinct species, Encephalomyocarditis virus and Theilovirus. We now report the complete nucleotide sequences of three Theiler's murine encephalomyelitis virus ( Encephalomyocarditis virus (EMCV) and Theilovirus are two distinct species in the Cardiovirus genus of the family Picornaviridae (52). The EMCVs comprise a single serotype and have a wide host range (64), while the Theilovirus species, until recently, included two serotypes, Theiler's murine encephalomyelitis virus (TMEV) and Vilyuisk human encephalomyelitis virus (VHEV), which appear to have much narrower host ranges than EMCV. The nucleotides of the RNA genomes of EMCV and TMEV are ϳ58% identical, and the amino acids of their polyproteins are ϳ50% identical. The amino acids of the capsid regions of TMEV and EMCV show the highest level of identity (ϳ62%), resulting in their cross-reactivity in serological tests measuring broad antigenicity (complement fixation [CF] and enzyme-linked immunosorbent assays) but not in virus neutralization (VN) assays.TMEVs were originally isolated from mice (54) and later from rats (18). Serological studies indicate that the feral house mouse Mus musculus is the natural host for TMEV (10, 29). In the early 1930s, TMEVs were isolated from colony-bred mice that developed spontaneous paralysis (54, 55). Based on the flaccid paralysis observed, indicative of the involvement of anterior horn cells or motor neurons, and on the revealed pathological changes of degenerating anterior horn cells, accompanied by microglial proliferation, these viruses were originally referred to as mouse polioviruses (41). In contrast to the strict motor neuron-trophic nature of human poliovirus in mice (21) and humans, TMEVs target both the anterior (motor) and posterior (sensory) neurons in the gray matter of the spinal cord (2, 27, 50). However, TMEVs are enteric pathogens that cause primarily asymptomatic infections of the digestive tract in colony-bred (nonbarrier) mice, and the spread of the virus to the mouse central nervous system (CNS) is rare.