“…However, Klaas and Zadoks recently suggested that this binary classification of bacterial species as contagious or environmental is misleading, because in reality many bacterial species, notably S. aureus and Streptococcus uberis, can be transmitted Abbreviations ANT, adjoining nucleotide triplet; CCK-8, Cell Counting Kit-8; CNCI, coding-non-coding index; CPC, coding potential calculator; EMT, epithelial-mesenchymal transition; FC, fold change; FPKM, fragments per kilobase of transcript per million fragments mapped; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; GO, gene ontology; IL, interleukin; KEGG, Kyoto Encyclopedia of Genes and Genomes; KO, knockout; lincRNA, long intervening non-coding RNA; lncRNA, long non-coding RNA; LPS, lipopolysaccharide; LTA, lipoteichoic acid; MEC, mammary epithelial cell; ORF, open reading frame; QTLdb, quantitative trait locus database; QTL, quantitative trait locus; sgRNA, small guide RNA; SMA, smooth muscle actin; TGF-b1, transforming growth factor b 1; TLR, toll-like receptor; TNF-a, tumor necrosis factor-a. in multiple ways [4]. Lipopolysaccharides (LPS), the major structural elements of Gram-negative bacteria such as E. coli, triggers strong immune responses via toll-like receptor (TLR) 4 [5], while lipoteichoic acid (LTA), an important cell wall component of from Gram-positive bacteria such as S. aureus, introduces inflammation by TLR2 [6].…”