An Overview of Allele Mining for Crop Improvement: TILLING and Eco-TILLING

Abstract

The primary goal of every plant breeder is to identify gene alleles and then use them in crop improvement programmes. If there is no population variation, there cannot be a breeding programme. Breeders need a lot of labour and money to screen germplasm for a desired gene. Additionally, these screenings are compliant with environmental effects. The method of "allele mining" is employed to identify suitable alleles of a candidate gene affecting important agronomic properties or naturally occurring allelic variations. TILLING and Eco-TILLING are the ideal solutions to this issue for allele mining. A technique known as "tilling" uses mutagens to introduce new diversity in a specific allele. Then, different sequencers are used to screen the diversity in a gene to identify different mutations. The best mutant among them can then be directly used in breeding programmes. In a modified version, alleles of a gene that are present in the population are identified by screening natural populations. Eco-TILLING is the name of this fresh iteration of the technology. The generation of novel haplotypes, the use of molecular markers to characterize genetic diversity and the syntenic links across crop genotypes, as well as marker-assisted selection are just a few of the many applications of allele mining in agriculture and crop improvement. Many genes may be found and used in the breeding of many crop species using these reverse genetics techniques.Allele mining