Abstract:The large memory requirement becomes the challenge for the NGS technologies, as the memory is the bottleneck for every application. There is need to reduce the memory utilization for the de Bruijn graph, so as to it could fit in low memory space. This work provides the efficient memory
utilization for the de Bruijn graph. The minimizer breaks the reads into numerous little partitions with the goal that every partition could be loaded into main memory one by one; they process separately then later on merge to … Show more
Set email alert for when this publication receives citations?
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.