the cortico-striatal-pallidal-thalamic and limbic circuits are suggested to play a crucial role in the pathophysiology of depression. Stimulation of deep brain targets might improve symptoms in treatment-resistant depression. However, a better understanding of connectivity properties of deep brain structures potentially implicated in deep brain stimulation (DBS) treatment is needed. Using highdensity EEG, we explored the directed functional connectivity at rest in 25 healthy subjects and 26 patients with moderate to severe depression within the bipolar affective disorder, depressive episode, and recurrent depressive disorder. We computed the Partial Directed Coherence on the source EEG signals focusing on the amygdala, anterior cingulate, putamen, pallidum, caudate, and thalamus. The global efficiency for the whole brain and the local efficiency, clustering coefficient, outflow, and strength for the selected structures were calculated. In the right amygdala, all the network metrics were significantly higher (p < 0.001) in patients than in controls. The global efficiency was significantly higher (p < 0.05) in patients than in controls, showed no correlation with status of depression, but decreased with increasing medication intake (-=. =. R 0 59 and p 1 52e 05 2). the amygdala seems to play an important role in neurobiology of depression. Practical treatment studies would be necessary to assess the amygdala as a potential future DBS target for treating depression. Affective disorders belong to the most common and most serious psychiatric disorders 1. A crucial role of the cortico-striatal-pallidal-thalamic and limbic circuits in the neurobiology of depression was repeatedly reported 2-4. Magnetic resonance imaging, functional magnetic resonance imaging (fMRI), magnetoencephalographic, and electroencephalographic (EEG) studies have confirmed that depressive patients show structural impairments and functional dysbalances of brain networks that involve structures engaged in (a) emotions, i.e. amygdala, subgenual anterior cingulate, caudate, putamen and pallidum 3,5-12 ; (b) self-referential processes, i.e. medial prefrontal cortex, precuneus, and posterior cingulate cortex 13,14 ; (c) memory, i.e. hippocampus, parahippocampal cortex 15 ; (d) visual processing, i.e. fusiform gyrus, lingual gyrus, and lateral temporal cortex 16 ; and (e) attention, i.e. dorsolateral prefrontal cortex, anterior cingulate cortex (ACC), thalamus, and insula 10-12,17. Moreover, post-mortem morphometric measurements revealed smaller volumes of the hypothalamus, pallidum, putamen and thalamus in patients with affective disorders 18. Many depressive patients fail to respond to pharmacological therapy resulting in 1-3% prevalence of treatment-resistant depression (TRD) 19. One of the newest therapeutic approaches for TRD is an invasive direct electrical stimulation of relevant deep brain structures 20. Both unipolar and bipolar depression patients might benefit from deep brain stimulation (DBS) treatment 21 , although an optimal approach, incl...