AMY-1 has been identified by us as a c-Myc-binding protein and was found to stimulate c-Myc transcription activity. AMY-1 was also found to be associated with protein kinase A anchor protein 84/149 (S-AKAP84/ AKAP149) in the mitochondria in somatic cells and sperm, suggesting that it plays a role in spermatogenesis. To determine the molecular function of AMY-1, a two-hybrid screening of cDNAs encoding AMY-1-binding proteins was carried out with AMY-1 as a bait using a human testis cDNA library, and a clone encoding a novel protein, AAT-1, was obtained. Three isoforms of AAT-1, AAT-1␣, -, and -␥, were found to be derived from an alternative splicing of the transcripts of the aat-1 gene, which was mapped at human chromosome 3q13-3q21. AAT-1 was found to be specifically expressed in the testis during the course of spermatogenesis and also to be present in the spermatid and mature sperm, as was AMY-1. AAT-1␣ was found to bind to and be colocalized in mitochondria with AMY-1 in human HeLa and mouse GC-1 cells. Furthermore, AAT-1␣ was found to bind to the N-terminal half of S-AKAP84/AKAP149 in a quaternary complex with AMY-1 and a regulatory subunit (RII) of cAMP-dependent kinase (PKA), in which AAT-1␣ was associated with RII via S-AKAP84/AKAP149, in rat testis and HeLa cells. It was then found that AAT-1␣ weakly stimulated a phosphorylation activity of PKA and also that AAT-1 itself was phosphorylated by PKA in vivo and in vitro. These results suggest that both AAT-1 and AMY-1 play roles in spermatogenesis.We have reported that AMY-1 (associate of Myc-1) bound to Myc box II in the N-proximal region of c-Myc, a transcriptional activation region of c-Myc (1), and stimulated E-box-dependent transcription activity of c-Myc (1). Although two mRNAs, AMY-1S and AMY-1L, which are derived from the alternative usage of poly(A) adenylation signals, encode the same protein, AMY-1, AMY-1S and AMY-1L mRNAs are strongly expressed in the testis and ubiquitously in all the tissues, respectively (1). AMY-1 was found to be a stimulating factor for the initial step of erythrocyte differentiation of human K562 cells, suggesting that AMY-1 is a trigger of differentiation of K562 cells into erythrocyte cells and that AMY-1 has a function independent of or different from that of c-Myc (2). Furthermore, we have found that AMY-1 binds to AKAP149 and its splicing variant, S-AKAP84, which is expressed in the testis and is an anchor protein of cAMP-dependent protein kinase (PKA) 1 (3). AKAP is a protein that translocates PKA to the specific sites where the individual PKA works, and more than 10 AKAPs have so far been identified (4 -6). Of the identified AKAPs, S-AKAP84 and AKAP149 have been found to anchor PKA to the mitochondria to phosphorylate the target proteins in the testis and other cells, respectively. Although some target proteins to be phosphorylated by PKA in the mitochondria have been identified, the physiological significance of their phosphorylation is not clear. It has been reported that tyrosine phosphorylation of proteins plays...