Lipoxygenases 1 and 2 were localized in etiolated germinating soybean seeds (Glycine max [L.]. Meff. var. Williams) by an indirect immunofluorescence staining technique. Sections of paraffin-embedded seedlings were stained with affinity-purified antibodies directed against lipoxygenase 1 or 2. The specificity of the immunofluorescence technique was examined by use of nonimmune serum or immunoglobulin G preparations after total adsorption with the appropriate lipoxygenase coupled to Sepharose 4B.After immunofluorescence staining with antilipoxygenase 1 or 2 IgG storage tissues of cotyledons fluoresce strongly the first days of germination. After 3 days, the abaxial hypodermis, the epidermis, and the vascular bundle sheaths show fluorescence, especially after incubation with antilipoxygenase 2 IgG. Fluorescence in cortex and pith of the hypocotyl migrates to the vascular cylinder during germination. In primary leaves, all tissues show fluorescence after I day of germination. In storage tissues of cotyledons, cytoplasm around the protein bodies fluoresces, whereas in other tissues protein bodies or other large cell organelles fluoresce.It is reasonable to suggest that lipoxygenase exerts its function in cells at the time that rigorous changes in metabolism take place, namely at the start of mobilization of reserves in storage tissues and start of biosynthesis of chloroplastids in several tissues.The enzyme lipoxygenase (linoleate:oxygen reductase, EC 1.13.11.12) catalyzes the dioxygenation of fatty acids containing a methylene-interrupted cis,cis-pentadiene structure. In 1947, Theorell et al. (23) fatty acids (17).As yet the physiological role of lipoxygenase is far from clear. It appears that lipoxygenase activity is maximal during the early stages of seed germination. Although soybeans are epigeous, seedlings remain essentially heterotrophic during the first 10 d (18). Sugars, primarily sucrose and stachyose in the cotyledons and embryonic axis, are the principal carbon sources during the first 3 d ofgermination (1). Subsequently, fat utilization increases and continues for about 10 d. Protein utilization which starts almost immediately, accelerates during the first 10 d and continues up to cotyledonary senescence (12). Holman (1 1) studied the relationship between lipoxygenase activity and changes in fat composition during germination ofsoybean seeds. He found that lipoxygenase activity at pH 9.0 declines sharply after the 2nd d while from the 3rd d linoleic acid and linolenic acid contents begin to decrease. Both variations in lipoxygenase activity of different plant tissues during germination and data dealing with subcellular localization of lipoxygenases have been reviewed by Douillard (6, 7). Lipoxygenase usually is soluble and localized in storage tissues of the seeds of most plants. Knowledge on the exact cellular and subcellular localization in germinating seeds can throw new light on the physiological function of lipoxygenase. Hitherto, localization in subcellular fractions has been examined by...