NEMO (NF-B essential modulator) is a regulatory protein essential to the canonical NF-B signaling pathway, notably involved in immune and inflammatory responses, apoptosis, and oncogenesis. Here, we report that the zinc finger (ZF) motif, located in the regulatory C-terminal half of NEMO, forms a specific complex with ubiquitin. We have investigated the NEMO ZF-ubiquitin interaction and proposed a structural model of the complex based on NMR, fluorescence, and mutagenesis data and on the sequence homology with the polymerase ubiquitinbinding zinc finger involved in DNA repair. Functional complementation assays and in vivo pull-down experiments further show that ZF residues involved in ubiquitin binding are functionally important and required for NF-B signaling in response to tumor necrosis factor-␣. Thus, our findings indicate that NEMO ZF is a bona fide ubiquitin-binding domain of the ubiquitin-binding zinc finger type.The NF-B transcription factors regulate the expression of genes involved in inflammation, immunity, cell proliferation, apoptosis, and oncogenesis (1). The classical NF-B signaling pathway is induced in response to proinflammatory cytokines (interleukin-1, TNF-␣), 5 antigens, and endotoxins. Although different receptors and downstream molecules are engaged depending on the stimulus, they all transduce signals through the IKK complex. These active complexes comprise two catalytic kinase subunits, IKK␣ and/or IKK, and a dimer of regulatory subunits termed NEMO, which is required for IKK complex activity and subsequent NF-B activation (2, 3).The N-terminal part of NEMO interacts with the IKK kinases, whereas the regulatory C-terminal half is involved in signal recognition (4, 5). The latter comprises the CC2-LZ domain, including a coiled-coil (CC2) and a leucine zipper (LZ) motif and a CCHC-type zinc finger (ZF) domain (Fig. 1). The CC2-LZ domain is required for NEMO oligomerization (6, 7) and contains a ubiquitin-binding domain (UBD) that preferentially interacts with Lys-63-polyubiquitin (Lys-63-polyUb) chains (8, 9). Lys-63-polyUb binding through the CC2-LZ domain of NEMO is required for NF-B signaling from several different receptors. In the case of TNF-␣ receptor 1 (TNFR1), the IKK complex seems to be recruited to the TNFR1 receptor via interaction with Lys-63-polyubiquitinated RIP1 protein (8, 9). In addition to binding Lys-63-polyUb, a minor fraction of NEMO undergoes ubiquitination (post-translational modification via the covalent attachment of ubiquitin) within the regulatory portion of NEMO. Several monoubiquitination and Lys-63-polyubiquitination sites on NEMO have been identified, including a Lys-399 residue in the ZF domain (10), and the site of modification and its impact on IKK activity appear to be signal-dependent (11-13).Although the CC2-LZ domain of NEMO is required for a wide range of NF-B-inducing signals, the role of the NEMO ZF domain remains controversial (14, 15) and appears to depend on the stimulus. Several studies reported that NEMO ZF is required for interleukin-1 and T...