Agmatine, a divalent diamine with two positive charges at physiological pH, is transported into the matrix of liver mitochondria by an energy-dependent mechanism, the driving force of which is the electrical membrane potential. Its binding to mitochondrial membranes is studied by applying a thermodynamic treatment of ligandreceptor interactions on the analyses of Scatchard and Hill. The presence of two mono-coordinated binding sites S 1 and S 2 , with a negative influence of S 2 on S 1 , has been demonstrated. The calculated binding energy is characteristic for weak interactions. S 1 exhibits a lower binding capacity and higher binding affinity both of about two orders of magnitude than S 2 . Experiments with idazoxan, a ligand of the mitochondrial imidazoline receptor I 2 , demonstrate that S 1 site is localized on this receptor while S 2 is localized on the transport system. S 1 would act as a sensor of exogenous agmatine concentration, thus modulating the transport of the amine by its binding to S 2 .