Water management remains a key challenge in polymer-electrolyte fuel cells (PEFCs). In this work, a pseudo 3-D (1+2D) model is developed to account better for changes of water management along the channel, as well as verify the possibilities of using differential cells for data capture. An accurate 2-D membrane-electrode-assembly (MEA) model is developed for differential cell modeling, which is combined with an along-the-channel stepping algorithm to account for down the channel changes in pressure, temperature, reactant concentration, and relative humidity. Variations in cell performance along the channel due to changes in operating conditions are characterized quantitatively and optimized. The 1+2D model is found to be critical at dry and low stoichiometry cell operations, where along the channel