The dynamic state of infection of 11 ducks with the duck hepatitis B virus was investigated. Chronic infections were established in newly hatched ducklings by inoculation with a mixture of wild-type virus and a mutant virus with a partial replication defect. As expected, the wild-type virus was rapidly enriched in the virus population during the spread of infection. Enrichment thereafter was correlated with normal growth of the liver, with the average mutant-to-wild-type ratio stabilizing for at least 2 months beyond the time at which the liver mass stabilized. Using experimentally determined growth rates for the mutant and wild-type viruses, we estimated that after the spread of infection, competition between the two virus strains was limited by the amount of replication required to infect new hepatocytes in the growing livers. The results suggest that, in a chronically infected liver, the selection of variants with a replication rate advantage is inefficient and that the emergence of such variants would depend on induced liver cell turnover, such as that occurring during chronic hepatitis.Hepadnaviruses cause chronic infections of the liver in a variety of animal species (for reviews, see references 5 and 17). In the absence of inflammation, infection becomes stably established in every susceptible hepatocyte, persisting without causing any apparent cytopathic effect. The noncytopathic state of infection is possible because virus replication is regulated within the infected cell at a level that does not interfere with normal cellular functions. The major mechanism for this regulation is thought to act through copy number control of viral genes in the nucleus (25,26).Active viral genes are found as a pool of up to 20 doublestranded covalently closed circular DNA (cccDNA) molecules (14,20,26). The pool of cccDNA molecules is established early in the infection. The infecting viral DNA molecule is first converted directly to cccDNA and is transcribed in the nucleus to produce viral mRNAs and proteins (1,4,24). The cccDNA is then replicated through transcription of RNA pregenomes, transport of pregenomes to the cytoplasm, and reverse transcription within newly formed viral nucleocapsids to produce double-stranded circular DNA with an open, relaxed conformation (rcDNA) (14, 21, 23). New cccDNA molecules are then formed by the transport of the rcDNA molecules into the nucleus and their conversion to cccDNA (26,27). By the time that an average of 10 to 20 cccDNA molecules have been formed, sufficient levels of viral envelope proteins, particularly the large envelope protein, preS, have accumulated to direct all rcDNA-containing nucleocapsids into the pathway for enveloped virus assembly and secretion. This process effectively prevents further production of cccDNA as long as sufficient intracellular concentrations of preS protein are maintained in the cell to direct nucleocapsids into the virus assembly pathway (8,9,24,25). The question of the stability of the cccDNA molecules formed during this process is still unreso...