The turnover of collagen triple-helical structure (collagenolysis) is a tightly regulated process in normal physiology, and has been ascribed to small number of proteases. Several members of the matrix metalloproteinase (MMPs) family possess collagenolytic activity, and the mechanisms by which these enzymes process triple-helices are beginning to be unraveled. The present study has utilized 2 triple-helical sequences to compare the cleavage site specificities of 10 MMPs. One substrate featured a continuous Gly-Xxx-Yyy sequence (Pro-Leu-Gly~Met-Arg-Gly) while the other incorporated an interruption in the Gly-Xxx-Yyy repeat (Pro-Val-Asn~Phe-Arg-Gly). Both sequences were selectively cleaved by MMP-13 while in linear form, but neither proved to be selective within a triple-helix. This suggests that the conformational presentation of substrate sequences to an MMP active site is critical for enzyme specificity, in that activities differ when sequences are presented from an unwound triple-helix versus an independent single strand. Differences in specificity between secreted and membranetype (MT) MMPs were also observed for both sequences, where MMP-2 and MT-MMPs showed an ability to hydrolyze a triple-helix at an additional site (Gly-Gln bond). Interruption of the triple-helix had different effects on secreted MMPs and MT-MMPs, as MT-MMPs could not hydrolyze the Asn-Phe bond, but instead cleaved the triplehelix nearer the C-terminus at a Gly-Gln bond. It is possible that MT-MMPs have a requirement for Gly in the P 1 subsite in order to be able to efficiently process a triple-helical molecule. Analysis of individual kinetic parameters and activation energies indicated different substrate preferences within secreted MMPs, as MMP-13 preferred the interrupted sequence while MMP-8 showed little discrimination between non-interrupted and interrupted triple-helices. Based on the present and prior studies, we can assign unique triple-helical peptidase behaviors to the collagenolytic MMPs. Such † This work was supported by the National Institutes of Health (AR 40994 to K.B., CA 98799 and EB 000289 to G.B. The sequence specificities of collagenolytic MMPs have been extensively examined utilizing single-stranded peptides, peptide libraries, and phage display libraries. These include studies of MMP-1, MMP-2, and MMP-8 (10,11), 13), and MT1-MMP (11,14-17). However, there are only a few studies that described the effects of amino acid substitutions within a triple-helical context on MMP activity (5,9,18,19). The influence of triple-helical structure on the interaction between MMP subsites and individual substrate residues has not been explored, but may provide additional information for the mechanism of collagenolysis, the understanding of collagen specificity, and the design of selective inhibitors.
NIH Public AccessCollagenolytic activity may also be considered in light of an array of diseases caused by mutations occurring in collagen, such as osteogenesis imperfecta (20)
MATERIALS AND METHODSAll standard chemicals were ...