ABSTRACT:The use of multiple depletion curves for the estimation of maximum velocity of the metabolic reaction (V max ), the Michaelis constant (K m ), and intrinsic clearance (CL int ) was thoroughly evaluated by means of experimental data and through a series of Monte Carlo simulations. The enzyme kinetics of seven compounds were determined using the multiple depletion curves method (MDCM), the traditional initial formation rate of metabolite method (IFRMM), and the "in vitro t 1 ⁄2" method, and the parameter estimates that were derived from the three methods were compared. The impact of a change in enzyme activity during the incubation period on the parameter estimates and the possibility to correct for this were also investigated. The MDCM was in good overall agreement with the IFRMM. Correction for a change in enzyme activity was possible and resulted in a better concordance in CL int estimates. The robustness of the method in coping with different rates of substrate turnover and variable starting concentrations were also demonstrated through Monte Carlo simulations. Furthermore, the limitations imposed by assumptions inherent in the in vitro t 1 ⁄2 method were demonstrated both experimentally and by simulations. This study demonstrates that the MDCM is a robust and efficient method for estimating enzyme kinetic variables with high accuracy and precision. The method may potentially be used in a wide range of applications, from pure enzyme kinetics to in vitrobased predictions of the pharmacokinetics of compounds with multiple and/or unknown metabolic pathways.Estimation of metabolic intrinsic clearance (CL int ) is currently included in many drug discovery programs. The most frequently used assay is the "in vitro t 1 ⁄2" method (T 1 ⁄2M), in which CL int is derived from the monoexponential slope of a single depletion curve (Obach, 1999). This method is used both for ranking compounds with respect to metabolic stability and for the prediction of metabolic clearance in animals and humans. The data are usually obtained from incubations with microsomes or fresh or cryopreserved hepatocytes (Iwatsubo et al., 1997;Obach et al., 1997;Rodrigues, 1997;Ito and Houston, 2005). CL int , defined as the maximum velocity of the metabolic reaction (V max ) divided by the Michaelis constant (K m ), the substrate concentration that yields half of V max , is by this means used as the link between fundamental enzyme kinetics and in vivo pharmacokinetic variables (Rane et al., 1977). Although the T 1 ⁄2M approach is fast, it is built on the assumption that the initial concentration (C 0 ) is well below K m . This assumption is often valid, but, if not, the method will underestimate CL int and thus underpredict the rate of hepatic clearance in vivo. The basic assumption of C 0 Ͻ ϽK m is usually not confirmed and may be one of several contributing factors to the tendency of systematic underprediction of hepatic clearance seen in the literature (Carlile et al., 1999;Obach, 1999;Ito and Houston, 2005). The ability to predict cleara...