Stereocilia were isolated from bullfrog (Rana catesbeiana) saccular hair cells by nitrocellulose adhesion. The high purity and high yield of the preparation were demonstrated by microscopy. SDS/PAGE of stereociliary proteins resolved 12-15 major bands. Actin, previously identified as a component of the stereociliary core, was identified in purified stereocilia as a band comi rating with authentic actin and by phalloidin labeling of intact isolated stereocilia. Fimbrin was identified in immunoblots of purified stereocilia. The most abundant other proteins migrated at 11, 14, 16-19, 27, and 36 kDa. Demembranated stereociliary cores consisted primarily of protein bands corresponding to actin and fimbrin and several proteins ranging from 43 to 63 kDa. Because the adaptation mechanism in hair cells is calcium-sensitive and seems localized to stereocilia, we sought evidence for calciumbinding proteins in stereocilia. Calmodulin and calbindin antibodies labeled stereocilia in intact cells. A protein band in purified stereocilia exhibited a Ca2+-dependent shift in electrophoretic mobility identical to that of authentic calmodulin, and the 27-kDa band may represent calbindin. These biochemical data demonstrate that stereocilia consist of a relatively small set of proteins. Most of these, including those involved in transduction and adaptation, are as yet uncharacterized. The availability ofpurified stereocilia should prove useful in further studies of structure-function relationships in these mechanically sensitive organelles.Hair cells, the receptor cells of the auditory and vestibular systems, transduce displacements of their apical hair bundle into electrical signals. The stereocilia constituting the bundle, which share structural properties with intestinal microvilli and growth-cone filopodia, are the mechanically sensitive organelles: displacement is thought to alter tension on filamentous links between their tips, which directly opens ion channels (1-3). The transduction current adapts to maintained stimuli, through a tension-altering mechanism (4, 5) thought to be situated in the tips of stereocilia (6).Although the physiology of transduction and adaptation is understood in some detail, the proteins involved in these processes are largely unknown. Because of the difficulty in purifying sufficient amounts of stereocilia, protein identification has been pursued through immunocytochemistry. Thus the structural proteins actin (7,8) To study the biochemistry of stereocilia we developed a purification technique that exploits the adhesion of the apical ends of stereocilia to nitrocellulose paper and the mechanical fiagility of the narrow basal ends. A related strategy has been used to adsorb small numbers of piscine stereocilia onto coverslips for ultrastructural studies (13). The nitrocellulose adhesion method, which we term "bundle blot" purification, gave a sufficiently high yield of pure stereocilia for biochemical analysis. Some results have appeared in preliminary form (14). leupeptin, 0.15 LM pepstatin...