A Vitamin D Receptor Gene Polymorphism in the Translation Initiation Codon: Effect on Protein Activity and Relation to Bone Mineral Density in Japanese Women
Abstract:The effect of a T-C transition polymorphism at the translation initiation codon of the human vitamin D receptor (VDR) gene on the biological function of the encoded protein was investigated. Of 239 Japanese women volunteers subjected to genotype analysis for this polymorphism, 32 (13%) were genotype MM (the M allele is ATG at the putative translation start site), 75 (31%) were genotype mm (the m allele is ACG at the putative translation start site), and 132 (55%) were genotype Mm. The bone mineral density (BMD… Show more
“…Fok I polymorphism is known to alter ATG start codon to ACG, that shortens the resulting receptor protein by three amino acid length (Arai et al, 1997;Miyamato et al, 1997;Gross et al, 1998;Jurutka et al, 2000) which is represented by F. This F allele has been repeatedly suggested to transmit stronger anti-proliferative and prodifferentation signals, by interacting with TFIIB (Jurutka et al, 2000;Whitfield et al, 2001;Wong et al, 2003). This observation in our ethnic population is consistent with some of the previous observations found among different races in different parts of the world (Arai et al, 1997;Jurutka et al, 2000).…”
Roles of the vitamin D receptor in etiology of cancers, including colorectal cancer, have been repeatedly stressed in different parts of the world. A case control study aimed to evaluate the relationship between the two was therefore initiated in Kashmir, known both for its increasing incidence of gastrointestinal cancers and deficiency of micro-nutrients especially vitamin D. The study included a total of 617 subjects (312 colorectal cancer cases and 305 controls), with sampling carried out over a period of 5 years. DNA samples from the blood of the subjects were analyzed for start codon Fok I VDR polymorphism. We obtained a 1.3 fold increased risk among individuals homozygous for f variants as compared to subjects homozygous for F allele (odds ratio OR 1.3, 95%CI, 0.861-1.65). Our study also showed statistically significant results when dwelling and tumor location characteristics were stratified with Fok I polymorphism, all of which suggests a possible role of Fok I polymorphism in the etiology of CRC in Kashmir
“…Fok I polymorphism is known to alter ATG start codon to ACG, that shortens the resulting receptor protein by three amino acid length (Arai et al, 1997;Miyamato et al, 1997;Gross et al, 1998;Jurutka et al, 2000) which is represented by F. This F allele has been repeatedly suggested to transmit stronger anti-proliferative and prodifferentation signals, by interacting with TFIIB (Jurutka et al, 2000;Whitfield et al, 2001;Wong et al, 2003). This observation in our ethnic population is consistent with some of the previous observations found among different races in different parts of the world (Arai et al, 1997;Jurutka et al, 2000).…”
Roles of the vitamin D receptor in etiology of cancers, including colorectal cancer, have been repeatedly stressed in different parts of the world. A case control study aimed to evaluate the relationship between the two was therefore initiated in Kashmir, known both for its increasing incidence of gastrointestinal cancers and deficiency of micro-nutrients especially vitamin D. The study included a total of 617 subjects (312 colorectal cancer cases and 305 controls), with sampling carried out over a period of 5 years. DNA samples from the blood of the subjects were analyzed for start codon Fok I VDR polymorphism. We obtained a 1.3 fold increased risk among individuals homozygous for f variants as compared to subjects homozygous for F allele (odds ratio OR 1.3, 95%CI, 0.861-1.65). Our study also showed statistically significant results when dwelling and tumor location characteristics were stratified with Fok I polymorphism, all of which suggests a possible role of Fok I polymorphism in the etiology of CRC in Kashmir
“…The ff and Ff forms of the VDR gene are associated with a decreased VDR efficiency (24). The high prevalence of Ff genotype in our population is accord to (25).…”
Transcriptional activity of the vitamin D receptor (VDR) gene is regulated by androgen receptor (AR normocalciuric (mean=21.62 ± 3.384 vs. 20.11 ± 3.182; P=0.034
“…This polymorphism results in different translation initiation sites: if the VDR gene contains C allele, the protein will be three amino acids shorter. Difference in length may result in altered VDR function [2,38].…”
Vitamin D receptor (VDR) gene encodes a transcription factor that influences calcium homeostasis and immunoregulation, and may play a role in neurological disorders including Parkinson's disease (PD). The investigations of the association between VDR and PD in different populations revealed various results. In a present study 100 PD patients and 109 healthy controls from the Hungarian population were genotyped for four polymorphic sites (BsmI, ApaI, FokI and TaqI) in the VDR gene. The polymorphisms were determined by polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP). Our results demonstrate an association between the FokI C allele and PD; the frequency of the C allele was significantly higher in PD patients than in controls, suggesting that this polymorphism may have a role in the development of PD in these patients.
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