2010
DOI: 10.1016/j.neuroscience.2010.08.007
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A transcriptional regulatory element critical for CHRNB4 promoter activity in vivo

Abstract: Genome-wide association studies have underscored the importance of the clustered neuronal nicotinic acetylcholine receptor subunit genes with respect to nicotine dependence as well as lung cancer susceptibility. CHRNB4, which encodes the nicotinic acetylcholine receptor β4 subunit, plays a major role in the molecular mechanisms that govern nicotine withdrawal. Thus, elucidating how expression of the β4 gene is regulated is critical for understanding the pathophysiology of nicotine addiction. We previously iden… Show more

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Cited by 7 publications
(4 citation statements)
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References 65 publications
(101 reference statements)
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“…These single nucleotide polymorphisms (SNPs) include non-coding variants across the gene cluster, as well as amino acid substitutions (http://www.ncbi.nlm.nih.gov/snp/). Given that cis-regulatory elements within the cluster coordinate transcription of these genes for assembly of 34-containing (34*) and 345 functional nAChRs (Scofield et al, 2010;Xu et al, 2006), the fact that a large number of SNPs map to non-coding segments of the cluster suggests that altered regulation of these genes can contribute to the pathophysiology of tobacco use. Indeed the risk for nicotine dependence seems to stem from at least two separate mechanisms: the variability in the mRNA levels of these genes and functional changes due to non-synonymous amino acid variants (Lu et al, 2009).…”
Section: Introductionmentioning
confidence: 99%
“…These single nucleotide polymorphisms (SNPs) include non-coding variants across the gene cluster, as well as amino acid substitutions (http://www.ncbi.nlm.nih.gov/snp/). Given that cis-regulatory elements within the cluster coordinate transcription of these genes for assembly of 34-containing (34*) and 345 functional nAChRs (Scofield et al, 2010;Xu et al, 2006), the fact that a large number of SNPs map to non-coding segments of the cluster suggests that altered regulation of these genes can contribute to the pathophysiology of tobacco use. Indeed the risk for nicotine dependence seems to stem from at least two separate mechanisms: the variability in the mRNA levels of these genes and functional changes due to non-synonymous amino acid variants (Lu et al, 2009).…”
Section: Introductionmentioning
confidence: 99%
“…44 Further, rs3813567 is located within the CHRNB4 promoter, which contains key regulatory elements, and is important to the temporal and tissue specific regulation of CHRNB4. 45,46 Regulation of the 15q24 region is complex with CHRNA5, CHRNA3 and CHRNB4 often being co-expressed. CHRNB4 contains a 3′ enhancer element involved in this combined regulation.…”
Section: Discussionmentioning
confidence: 99%
“…Although there is an a priori rationale to support the hypothesis that protein-coding variants are likely to confer functional relevance, a recent paper by Schork highlights the importance of untranslated regions (UTRs) and other non-coding variation for involvement in complex traits (Schork et al, 2013). Non-coding regions in the Chrn genes in rodents have been shown to play an important role in gene regulation (Bruschweiler-Li et al, 2010; McDonough and Deneris, 1997; McDonough et al, 2000; Scofield et al, 2010; Xu et al, 2006). Moreover, in vitro gene expression studies using cell culture models to examine human genetic variants in the non-coding regions of CHRN genes have demonstrated differential functional effects for SNP alleles (Ehringer et al, 2010; Flora et al, 2013; Gallego et al, 2013; Kamens et al, 2015).…”
Section: Introductionmentioning
confidence: 99%