Abstract-Heart failure (HF) is associated with reduced cardiac Na ϩ channel (SCN5A) current. We hypothesized that abnormal transcriptional regulation of this ion channel during HF could help explain the reduced current. Using human hearts explanted at the transplantation, we have identified 3 human C-terminal SCN5A mRNA splicing variants predicted to result in truncated, nonfunctional channels. As compared with normal hearts, the explanted ventricles showed an upregulation of 2 of the variants and a downregulation of the full-length mRNA transcript such that the E28A transcript represented only 48.5% (PϽ0.01) of the total SCN5A mRNA. This correlated with a 62.8% (PϽ0.01) reduction in Na ϩ channel protein. Lymphoblasts and skeletal muscle expressing SCN5A also showed identical C-terminal splicing variants. Variants showed reduced membrane protein and no functional current. Transfection of truncation variants into a cell line stably transfected with the full-length Na ϩ channel resulted in dose-dependent reductions in channel mRNA and current. Introduction of a premature truncation in the C-terminal region in a single allele of the mouse SCN5A resulted in embryonic lethality. Embryonic stem cell-derived cardiomyocytes expressing the construct showed reductions in Na ϩ channel-dependent electrophysiological parameters, suggesting that the presence of truncated Na ϩ channel mRNA at levels seen in HF is likely to be physiologically significant. In summary, chronic HF was associated with an increase in 2 truncated SCN5A variants and a decrease in the native mRNA. These splice variations may help explain a loss of Na Key Words: sodium channels Ⅲ transcriptional regulation Ⅲ mRNA splice variations Ⅲ heart failure Ⅲ arrhythmia H uman heart failure (HF) is associated with decreased cardiac voltage-gated sodium channel current. 1,2 Genetically mediated decreases in Na ϩ current have been implicated in the risk for sudden death, [3][4][5] and Na ϩ channel changes may contribute to the increased risk of sudden death in HF. 6,7 Because transcriptional alterations in other ion channels have been noted to contribute to current changes in HF, 8,9 we investigated Na ϩ channel protein and mRNA abundance in hearts explanted during cardiac transplantation to determine whether there were changes that might explain the reduced Na ϩ current previously reported in this tissue.
Materials and Methods
Detection of Human SCN5A 3UTR Variants by Rapid Amplification of cDNA Ends PCRTotal human RNA from normal fetal and adult whole hearts was purchased from Clontech (Mountain View, Calif). The RNA ligasemediated rapid amplification of cDNA ends (RACE) method was used to characterize the 3Ј ends of the human SCN5A mRNA using the GeneRacer kit (Invitrogen, Carlsbad, Calif). Primary and nested PCR reactions were performed with primers HE26F (on exon 26) and HE27F (on exon 27) specific to the human SCN5A gene and the GeneRacer 3Ј primer for amplifying the 3Ј-end fragment. The nested PCR products were cloned into pCR4-TOPO vector (Invitrogen) and se...