2003
DOI: 10.1016/s0168-9452(03)00195-x
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A single nucleotide polymorphism (SNP) marker linked to the fragrance gene in rice (Oryza sativa L.)

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Cited by 81 publications
(45 citation statements)
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“…Some progress has been made towards the identification of molecular markers linked to fragrance genes, including the SCU015RM (Cordeiro et al 2002) SNP marker (Jin et al 2003) and a single tube allele specific amplification (ASA) assay (Bradbury et al 2005b). However, these assays cannot work on a broad range of any one rice sample and predictions made from the results are not of high accuracy.…”
Section: Discussionmentioning
confidence: 99%
“…Some progress has been made towards the identification of molecular markers linked to fragrance genes, including the SCU015RM (Cordeiro et al 2002) SNP marker (Jin et al 2003) and a single tube allele specific amplification (ASA) assay (Bradbury et al 2005b). However, these assays cannot work on a broad range of any one rice sample and predictions made from the results are not of high accuracy.…”
Section: Discussionmentioning
confidence: 99%
“…Genetic analysis shows that a single recessive gene (fgr) on chromosome 8 is associated with rice fragrance and that the dominant Fgr allele is associated with lack of fragrance (Sood and Siddiq, 1978;Huang et al, 1994;Jin et al, 2003). A number of markers were identified that are closely linked to fgr (Ahn et al, 1992;Causse et al, 1994;Chen et al, 1997;Cho et al, 1998;Jin et al, 2003).…”
Section: Introductionmentioning
confidence: 99%
“…A number of markers were identified that are closely linked to fgr (Ahn et al, 1992;Causse et al, 1994;Chen et al, 1997;Cho et al, 1998;Jin et al, 2003). Two restriction fragment length polymorphism markers, RG1 and RG28, were identified that flank fgr, with the estimates of genetic distances ranging from 10 centimorgan (cM) (Causse et al, 1994) to 12 cM (Lorieux et al, 1996) to 25.5 cM (Cho et al, 1998).…”
Section: Introductionmentioning
confidence: 99%
“…Several independent lines of evidence suggest the genetic cause of rice fragrance is due to the loss of function of the betaine aldehyde dehydrogenase (BAD) homolog. Fragrance is a recessive trait (Lorieux et al 1996;Garland et al 2000;Jin et al 2003) which suggests it is a loss, rather than gain, of gene function that is responsible for fragrance. Several mapping studies have independently identified BAD2 as the candidate gene responsible for fragrance (Bradbury et al 2005a, b;Vanavichit et al 2006;Amarawathi et al 2008;Shi et al 2008) and sequencing of BAD2 in each case found a deletion within the gene which would render the gene non-functional.…”
Section: Introductionmentioning
confidence: 99%