␥-Aminobutyric acid type A (GABA A ) receptors are members of the Cys-loop superfamily of ligand-gated ion channels. Upon agonist binding, the receptor undergoes a structural transition from the closed to the open state, but the mechanism of gating is not well understood. Here we utilized a combination of conventional mutagenesis and the high precision methodology of unnatural amino acid incorporation to study the gating interface of the human homopentameric 1 GABA A receptor. We have identified an ion pair interaction between two conserved charged residues, Glu 92 in loop 2 of the extracellular domain and Arg 258 in the pre-M1 region. We hypothesize that the salt bridge exists in the closed state by kinetic measurements and free energy analysis. Several other charged residues at the gating interface are not critical to receptor function, supporting previous conclusions that it is the global charge pattern of the gating interface that controls receptor function in the Cys-loop superfamily.Fast inhibitory neurotransmission in the adult mammalian central nervous system is primarily mediated by the amino acid ␥-aminobutyric acid (GABA).2 So far, three types of GABA receptors have been identified, termed GABA A , GABA B , and the homopentameric 1 GABA A receptor, also known as GABA C (1, 2). Although GABA B is a G protein-coupled receptor, GABA A and GABA C receptors are homologous but distinct members of the Cys-loop superfamily of ligand-gated ion channels, which also includes the nicotinic acetylcholine (nAChR), serotonin, and glycine receptors. Members of this superfamily are composed of five subunits arranged around a central ionconducting pore, with each subunit consisting of a large extracellular domain, four transmembrane helices (M1-M4), and a large intracellular loop. The newest member of this family, the GABA C receptor (3), is expressed predominantly on retinal neurons, although recent studies indicate a wide distribution throughout the central nervous system (4 -6).The binding of agonist to a Cys-loop receptor triggers a complex structural transition that results in the opening of a "gate," allowing ions to flow through the channel (7). Identifying the linkage pathway has been limited by the lack of a complete atomic-resolution structure of any fast synaptic receptor. However, two breakthroughs have propelled the field into the structural age. The first is determination of the crystal structure of acetylcholine-binding protein (8), which is homologous to the extracellular domain of the nAChR and, by extension, all Cysloop receptors. This structural template provides critical insights into the nature of the binding site, but, of course, the ion channel and its gate are missing from such structures. Second, a refined electron microscopy structure of the Torpedo acetylcholine receptor by Unwin and co-workers (Protein Data Bank code 2BG9) has shed light onto the global structure and has suggested molecular determinants of functional mechanisms in Cys-loop receptors (9 -11).The available structural informati...