Anthocyanins are the flavonoid compounds that produce plant colors ranging from orange and red to various shades of blue and purple. This unit describes methods for extraction, isolation, and purification of anthocyanin pigments from plant tissues. These methods are essential laboratory operations prior to subsequent experimental work involving separation, characterization, and quantitation of the pigments (UNITS F1.2 & F1.3). The polar character of the anthocyanin molecule allows for its solubility in many different solvents such as alcohols, acetone, dimethyl sulfoxide, and water. The choice of extraction method should maximize pigment recovery with a minimal amount of adjuncts and minimal degradation or alteration of the natural state. Basic Protocol 1 describes the extraction of anthocyanins with acetone and their partition with chloroform. This procedure permits concentration of anthocyanin pigments in the aqueous phase while removing lipids, chlorophylls, and other water-insoluble compounds. The Alternate Protocol describes the extraction of anthocyanins with acidified methanolic solutions. Methanol is the most commonly used solvent for anthocyanin extraction because its low boiling point allows for rapid concentration of the extracted material. However, the resultant extract contains low-polarity contaminants and further purification may be necessary. Basic Protocol 2 describes a simple, fast, and effective method for purification of anthocyanins from polyphenolic compounds, sugars, and organic acids using solid-phase adsorption. The Support Protocol describes a method for preparing a finely powdered sample using liquid nitrogen. This produces a uniform composite sample with a high surface area, which allows for efficient pigment extraction. BASIC PROTOCOL 1 ACETONE EXTRACTION AND CHLOROFORM PARTITION OF ANTHOCYANINS In this method, acetone extracts the anthocyanins from the plant material, and chloroform partitioning further isolates and partially purifies the pigments. The addition of chloroform results in phase separation between the aqueous portion (which contains the anthocyanin, phenolics, sugars, organic acids, and other water-soluble compounds) and the bulk phase (which contains the immiscible organic solvents, lipids, carotenoids, chlorophyll pigments, and other nonpolar compounds). This method has the advantage of producing an extract with no lipophilic contaminants. The absence of a concentration step minimizes the risk of acid-dependent pigment degradation. Materials Powdered plant material (see Support Protocol), frozen Acetone 70% (v/v) aqueous acetone or aqueous acidified acetone: 70% aqueous acetone with 0.01% HCl Chloroform Acidified water: 0.01% (v/v) HCl in deionized, distilled water Waring Blender with stainless steel container (Waring) or general-purpose homogenizer Whatman no. 1 filter paper Buchner funnel Separatory funnel 500-ml boiling flask Rotary evaporator with vacuum pump or water aspirator, 40°C Contributed by Luis E. Rodriguez-Saona and Ronald E. Wrolstad