Abstract:This paper provides a review of the available literature on computational schemes for rational solvent design, with a focus on solvent extraction and crystallization (the two most common unit operations) in pharmaceutical industry. The computer-aided design of solvents is important as a cost-effective tool, especially with the regular development of new pharmaceutical molecules. Also, there is a need to minimize the amount and the number of solvents used with regard to environmental, health, and toxicological … Show more
“…A number of approaches have also investigated pharmaceutical applications of CAMD. We note here that a good review exists on the topic of pharmaceutical solvents already [69]. Chemmangattuvalappil et al…”
This article provides an introduction to and review of the field of computer-aided molecular design (CAMD). It is intended to be approachable for the absolute beginner as well as useful to the seasoned CAMD practitioner. We begin by discussing various quantitative structure-property relationships (QSPRs) which have been demonstrated to work well with CAMD problems. The methods discussed in this article are (1) group contribution methods, (2) topological indices, and (3) signature descriptors. Next, we present general optimization formulations for various forms of the CAMD problem. Common design constraints are discussed and structural feasibility constraints are provided for the three types of QSPRs addressed. We then detail useful techniques for approaching CAMD optimization problems, including decomposition methods, heuristic approaches, and mathematical programming strategies. Finally, we discuss many applications that have been addressed using CAMD.
“…A number of approaches have also investigated pharmaceutical applications of CAMD. We note here that a good review exists on the topic of pharmaceutical solvents already [69]. Chemmangattuvalappil et al…”
This article provides an introduction to and review of the field of computer-aided molecular design (CAMD). It is intended to be approachable for the absolute beginner as well as useful to the seasoned CAMD practitioner. We begin by discussing various quantitative structure-property relationships (QSPRs) which have been demonstrated to work well with CAMD problems. The methods discussed in this article are (1) group contribution methods, (2) topological indices, and (3) signature descriptors. Next, we present general optimization formulations for various forms of the CAMD problem. Common design constraints are discussed and structural feasibility constraints are provided for the three types of QSPRs addressed. We then detail useful techniques for approaching CAMD optimization problems, including decomposition methods, heuristic approaches, and mathematical programming strategies. Finally, we discuss many applications that have been addressed using CAMD.
“…Structurally feasible molecules are formed by combinations of UNIFAC groups using the structural constraints given in Table . The rationale for use of these constraints is provided in the literature …”
Section: Methodsmentioning
confidence: 99%
“…The candidate solvents selected or designed are to be subjected to screening experiments. Due to the practical importance of rational solvent selection and design, many researchers world‐wide have employed computer‐aided solvent selection and design tools for this purpose …”
Section: Introductionmentioning
confidence: 99%
“…Our use of the computer‐aided approach is based on literature review that shows that computer‐aided tools are extensively employed for solvent selection and design in the pharmaceutical industry. A previous publication from our group provides a comprehensive literature review of the use of the CAMD framework for the design of solvents for processes involving pharmaceuticals . A brief survey of the relevant literature is presented here.…”
We have employed a computer-aided approach to select and design task-specific organic solvents for the liquid-liquid extraction of ephedrine from its aqueous solution. We have identified three solvent performance indicators (SPIs) as the shortlisting criteria for solvents with desirable properties: high ephedrine solubility; low solvent loss; and high partition coefficient. Other properties that were considered include octanol-water partition coefficient and toxicity, which give a measure of the safety/health/environmental (SHE) impacts, and liquid viscosity, which is an important process design parameter. We have first analyzed the trends in these SPIs for a range of common organic solvents. Toluene (currently employed for the extraction of R-phenylacetylcarbinol, the precursor to ephedrine) has low solvent loss but relatively poor values of the other SPIs for ephedrine extraction, though with a relatively benign SHE impact. We are unable to identify a solvent (from the list of common organic solvents) that satisfies all the shortlisting criteria for use in the pharmaceutical industry and this provided the motivation for the design of task-specific solvents. We have designed organic solvents (acyclic aliphatic, aromatic with one side chain attachment, and aromatic with two side chain attachments) with superior values of SPIs than the reference solvent, toluene. We have employed limiting values on the melting and boiling points to ensure the designed solvents are liquids at the operating conditions. Designed aliphatic compounds contain the chloro-group(s), whereas there are aromatic solvents without the chloro-groups with better SPIs than toluene. Designed solvents without chloro-groups may be considered as the starting point for further screening experiments.
“…The ability to accurately estimate thermodynamic properties without the need for laboratory experiments has the potential to save both time and resources in fields such as polymer [147] and solvent [148] design as well as drug discovery. [12][13][14] This time and cost savings is important both in the design of new molecules, where properties are unknown, and 'reverse property prediction' where a model or molecule is designed to match specific experimental targets, such as designing metal-organic frameworks (MOFs) with specific gas loadings.…”
Current computational property prediction methods are limited in the number of molecules they can test at once. To predict properties for thousands or millions of molecules at once, new techniques must be developed with efficient computational scaling in the number of molecules simultaneously tested. In this dissertation, I develop a general approach to carry out computational alchemical free energy calculations using a variance minimized linear basis function approach. This approach provides a means to collect data for statistical free energy estimates that scales efficiently with the number of thermodynamic states or tested molecules. I achieve efficient speed-up over relying on simulation force code to compute energies required for free energy estimation.
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