Genetic studies on mouse models of asthma have identified interleukin-9 (IL9) as a determining factor in controlling bronchial hyperresponsiveness, a hallmark of the disease. Recently, the human IL9 receptor (hIL9R) gene locus has also been implicated in determining susceptibility to bronchial hyperresponsiveness and asthma. In order to evaluate the structure and function of the encoded product, we analyzed receptor transcripts derived from peripheral blood mononuclear cells of 50 unrelated donors. Sequence analysis of the entire coding region identified a splice variant that contains an in frame deletion of a single residue at codon 173 (⌬Q). This variant could be permanently expressed in a cytokine-dependent murine T-cell line but lacked the ability to induce proliferation in response to human IL9. In situ analyses of cells expressing the wild-type and ⌬Q receptors found both forms to be expressed at the cell surface, but the ⌬Q receptor was unable to bind hIL9 and could not be recognized by N-terminal specific antibodies. These findings demonstrate that hIL9R⌬Q presents an altered structure and function and suggests its potential role in down-regulating IL9 signaling in effector cells and associated biological processes.Asthma is a complex inflammatory disorder that is characterized by periodic airway obstruction, wheezing, and bronchial hyperresponsiveness (BHR) 1 (1). Clinical studies of asthma have revealed that the pathology of this disease is associated with widespread narrowing of the airways due to edema and infiltration of multiple inflammatory cells into the lung epithelia (2). These cell types include mast cells, eosinophils, B-cells, and TH2-lymphocytes as the predominant cell mediators of this disorder (3, 4). While these inflammatory cells appear to be important, their precise role in producing BHR is unclear and still under investigation. Nevertheless, the response to antigen and subsequent release of chemical inflammatory mediators (histamines, leukotrienes, prostaglandins, etc.) by a number of these cells has been documented (5).Genetic studies have suggested that BHR is a multigenic process (6 -11). Recently, we have identified interleukin-9 (IL9) as a factor in regulating airway hyperresponsivess in inbred strains of mice (12). C57BL/6 mice, which show low airway responsiveness, had undetectable levels of IL9 in activated splenocytes and in the lung, while DBA/2 mice, which have airway hypperresponsiveness, expressed robust levels of IL9 in both tissues. A role for IL9 in asthma and allergy has been supported by the findings that it has pleiotropic activities on cell types associated with these diseases such as TH2 lymphocytes, B-cells, mast cells, and eosinophils (13-19). In particular, IL9 has been shown to act as a growth and differentiation factor for mast cells and to enhance the release of IgE from B-cells. These two activities as well as the effect of IL9 on controlling BHR in mice suggest that it and its associated pathway(s) are involved in the pathogenesis of allergy and asthma. Mo...