Determination of enantiomeric excess (ee) in chiral compounds is a key step in the development of chiral catalyst auxiliaries and chiral drugs. Here, we describe a sensitive and robust fluorescence-based assay for the determination of ee in mixtures of enantiomers of 1,2-and 1,3-diols, chiral amines, amino alcohols, and amino acid-esters. The method is based on the dynamic self-assembly of commercially available chiral amines, 2formylphenylboronic acid, and chiral diols in acetonitrile to form diastereomeric fluorescent complexes. Each analyte enantiomer gives rise to a different diastereomer with a distinct fluorescence wavelength and intensity originating from the enantiopure fluorescent ligands. In this assay, enantiomers of amines and amine derivatives assemble with diol-type ligands containing bi-naphthol moiety (BINOL and VANOL), while diol enantiomers form complex with the enantiopure amine-type fluorescent ligand tryptophanol. This differential fluorescence can be utilized to determine the amount of each enantiomer in the mixture with errors below 1% ee. This method allows for the realtime evaluation of enantiomeric/diastereomeric excess (ee/de) and product yield of crude asymmetric reaction products in a high-throughput fashion. The only processes involved in 2 this protocol are high-throughput liquid dispensing of three components into 384-well plates and recording the fluorescence using automatic plate reader. Emergence of such high throughput approaches allows scaling up the screening of combinatorial libraries, and together with parallel synthesis creates a robust platform for discovering chiral catalysts or auxiliaries for asymmetric transformations and chiral drug development. The procedure takes 3-4 hours to run and requires 10-20 ng of the substrate per well. Our fluorescencebased assay offers distinct advantages over existing traditional methods as it is not sensitive to the presence of common additives or impurities as well as unreacted/incomplete utilized reagents and catalysts.