In the yeast Saccharomyces cerevisiae, multidrug resistance to unrelated chemicals can result from overexpression of ATP-binding cassette (ABC) transporters such as Pdr5p, Snq2p, and Yor1p. Expression of these genes is under the control of two homologous zinc finger-containing transcription regulators, Pdr1p and Pdr3p. Here, we describe the isolation, by an in vivo screen, of two new Pdr1p-Pdr3p target genes: HXT11 and HXT9. HXT11 and HXT9, encoding nearly identical proteins, have a high degree of identity to monosaccharide transporters of the major facilitator superfamily (MFS). In this study, we show that the HXT11 product, which allows glucose uptake in a glucose permease mutant (rag1) strain of Kluyveromyces lactis, is also involved in the pleiotropic drug resistance process. Loss of HXT11 and/or HXT9 confers cycloheximide, sulfomethuron methyl, and 4-NQO (4-nitroquinoline-N-oxide) resistance. Conversely, HXT11 overexpression increases sensitivity to these drugs in the wild-type strain, an effect which is more pronounced in a strain having both PDR1 and PDR3 deleted. These data show that the two putative hexose transporters Hxt11p and Hxt9p are transcriptionally regulated by the transcription factors Pdr1p and Pdr3p, which are known to regulate the production of ABC transporters required for drug resistance in yeast. We thus demonstrate the existence of genetic interactions between genes coding for two classes of transporters (ABC and MFS) to control the multidrug resistance process.Transmembrane solute transport is ensured in all eukaryotic cells by a set of proteins embedded in the plasma and the internal membranes. Most transport proteins characterized to date catalyze the uptake of solutes across the plasma membrane. Other plasma membrane transporters mediate extrusion of intracellular compounds into the medium, while others, located in intracellular membranes, catalyze efflux from or within the mitochondria, vacuole, peroxisomes, or secretion organelles. These membrane proteins are generally classified in three main categories: channels, facilitators (also named transporters, permeases, or carriers), and pumps (ATPases). Among them, one protein family of particular biological importance is the nonproton ATPase family encoding ATP-binding cassette (ABC) transporters, which appear to be conserved in all living organisms ranging from bacteria to humans (1, 13, 32). Alterations of certain ABC transporters can cause human genetic disorders such as cystic fibrosis (36), Zellweger syndrome (19), X-linked adrenoleukodystrophy (30), and the multidrug-resistance (MDR) phenotype shown by tumor cells which acquire resistance to a variety of chemotherapeutic agents. MDR phenotype is frequently linked to the increased expression, sometimes by gene amplification, of an integral membrane protein, a member of the ABC transporter family. This protein, called P-glycoprotein, functions as an ATP-dependent efflux pump for drugs (18).In the yeast Saccharomyces cerevisiae, a phenotype resembling the mammalian MDR exists and i...