The dynamics of DNAa nd RNAs tructures in live cells are important for understanding cell behaviors,s uch as transcription activity,p rotein expression, cell apoptosis,a nd hereditary disease,b ut are challenging to monitor in live organisms in real time.The difficulty is largely due to the lack of photostable imaging probes that can distinguish between DNAand RNA, and more importantly,are capable of crossing multiple membrane barriers ranging from the cell/organelle to the tissue/organ level. We report the discovery of ac ationic carbon quantum dot (cQD) probe that emits spectrally distinguishable fluorescence upon binding with doublestranded DNAa nd single-stranded RNAi nl ive cells,t hereby enabling real-time monitoring of DNAand RNAl ocalization and motion. Asurprising finding is that the probe can penetrate through various types of biological barriers in vitro and in vivo.Combined with standardand super-resolution microscopy, photostable cQDs allowtime-lapse imaging of chromatin and nucleoli during cell division and Caenorhabditis elegans (C.elegans) growth.