The gene order of the ml Moloney sarcoma virus (mMSV) specific pP60 gag (P60) was determined by direct chemical analysis of the polyprotein. P60 was cleaved with cyanogen bromide (CNBr) into eight partial and complete fragments ranging in mass from 10,000 daltons to 58,000 daltons. Peptide maps of these fragments were compared to maps of p15, p12, and three CNBr fragments of p30. (D. Bolognesi, personal communication). In these studies we show that the p30 of M-MuLV and m3MSV have comparable peptide maps and are similar to the maps of the NH2-terminal 20,000-dalton (Dal) mlMSV p30 CNBr fragment. Moreover, ml P60 and m3 P70 have similar peptide maps in an NH2-terminal CNBr fragment representing NH2-pl5-pl2 and the 20,000-Dal NH2-terminal portion of p30. Finally, we have identified peptides unique to a 10,500-Dal COOH-terminal fragment of m1MSV p30, which were not present in the p3Os of either M-MuLV or m3MSV p30. These studies suggest that the deletion in mlMSV gag may begin in the COOH terminus of the p30 reading frame.