“…for OG): A ) deuterating the alkyl chain at the required deuteration level starting from the corresponding fatty acid and using hydrothermal Pt/C catalysed H/D exchange reactions at 220 °C in the appropriate molar ratio of deuterium and hydrogen atoms in the mixture, reducing the fatty acid molecule to the corresponding alcohol; B ) attaching the deuterated alcohol to the corresponding acetylated bromo‐sugar head group (i.e. 2,3,4,6‐tetra‐O‐acetyl‐α‐D‐glucopyranosyl bromide and 2,3,6,2′,3′,4′,6′‐hepta‐O‐acetyl‐a‐D‐maltosyl bromide) according to standard procedures deacetylation of the sugar head group; C ) deuterating the sugar head to achieve the required deuteration level by using mild conditions of Raney Nickel as a catalyst in D 2 O/H 2 O mixture at 80 °C for 18 h. The latter step allows the incorporation of deuterium atoms on carbons adjacent to free hydroxyl groups (α positions) in the sugar head group with retention of configuration, but it does not affect any H/D back‐exchange at the more inert alkyl chain sites (see Supporting Information 2 for details).…”
Section: Resultsmentioning
confidence: 99%
“…conditions of Raney Nickel as a catalyst in D 2 O/H 2 O mixture at 80°C for 18 h. The latter step allows the incorporation of deuterium atoms on carbons adjacent to free hydroxyl groups (a positions) in the sugar head group with retention of configuration, but it does not affect any H/D back-exchange at the more inert alkyl chain sites [36][37][38] (see Supporting Information 2 for details).…”
Section: Synthesis Of Detergents With Controlled Deuteration Levels Imentioning
A novel and generally applicable method for determining structures of membrane proteins in solution via small-angle neutron scattering (SANS) is presented. Common detergents for solubilizing membrane proteins were synthesized in isotope-substituted versions for utilizing the intrinsic neutron scattering length difference between hydrogen and deuterium. Individual hydrogen/deuterium levels of the detergent head and tail groups were achieved such that the formed micelles became effectively invisible in heavy water (D O) when investigated by neutrons. This way, only the signal from the membrane protein remained in the SANS data. We demonstrate that the method is not only generally applicable on five very different membrane proteins but also reveals subtle structural details about the sarco/endoplasmatic reticulum Ca ATPase (SERCA). In all, the synthesis of isotope-substituted detergents makes solution structure determination of membrane proteins by SANS and subsequent data analysis available to nonspecialists.
“…for OG): A ) deuterating the alkyl chain at the required deuteration level starting from the corresponding fatty acid and using hydrothermal Pt/C catalysed H/D exchange reactions at 220 °C in the appropriate molar ratio of deuterium and hydrogen atoms in the mixture, reducing the fatty acid molecule to the corresponding alcohol; B ) attaching the deuterated alcohol to the corresponding acetylated bromo‐sugar head group (i.e. 2,3,4,6‐tetra‐O‐acetyl‐α‐D‐glucopyranosyl bromide and 2,3,6,2′,3′,4′,6′‐hepta‐O‐acetyl‐a‐D‐maltosyl bromide) according to standard procedures deacetylation of the sugar head group; C ) deuterating the sugar head to achieve the required deuteration level by using mild conditions of Raney Nickel as a catalyst in D 2 O/H 2 O mixture at 80 °C for 18 h. The latter step allows the incorporation of deuterium atoms on carbons adjacent to free hydroxyl groups (α positions) in the sugar head group with retention of configuration, but it does not affect any H/D back‐exchange at the more inert alkyl chain sites (see Supporting Information 2 for details).…”
Section: Resultsmentioning
confidence: 99%
“…conditions of Raney Nickel as a catalyst in D 2 O/H 2 O mixture at 80°C for 18 h. The latter step allows the incorporation of deuterium atoms on carbons adjacent to free hydroxyl groups (a positions) in the sugar head group with retention of configuration, but it does not affect any H/D back-exchange at the more inert alkyl chain sites [36][37][38] (see Supporting Information 2 for details).…”
Section: Synthesis Of Detergents With Controlled Deuteration Levels Imentioning
A novel and generally applicable method for determining structures of membrane proteins in solution via small-angle neutron scattering (SANS) is presented. Common detergents for solubilizing membrane proteins were synthesized in isotope-substituted versions for utilizing the intrinsic neutron scattering length difference between hydrogen and deuterium. Individual hydrogen/deuterium levels of the detergent head and tail groups were achieved such that the formed micelles became effectively invisible in heavy water (D O) when investigated by neutrons. This way, only the signal from the membrane protein remained in the SANS data. We demonstrate that the method is not only generally applicable on five very different membrane proteins but also reveals subtle structural details about the sarco/endoplasmatic reticulum Ca ATPase (SERCA). In all, the synthesis of isotope-substituted detergents makes solution structure determination of membrane proteins by SANS and subsequent data analysis available to nonspecialists.
“…Deuterated trehalose was produced by the National Deuteration Facility, ANSTO. This was achieved by catalytic exchange reactions following a procedure of Koch and Stuart using a Raney nickel catalyst [39,40]. Isotopic purity, determined by mass spectrometry and solution NMR, was 67.8% of the 14 non-exchangeable hydrogens in the trehalose molecule.…”
Trehalose, a natural disaccharide with bioprotective properties, is widely recognized for its ability to preserve biological membranes during freezing and dehydration events. Despite debate over the molecular mechanisms by which this is achieved, and that different mechanisms imply quite different distributions of trehalose molecules with respect to the bilayer, there are no direct experimental data describing the location of trehalose within lipid bilayer membrane systems during dehydration. Here, we use neutron membrane diffraction to conclusively show that the trehalose distribution in a dioleoylphosphatidylcholine (DOPC) system follows a Gaussian profile centred in the water layer between bilayers. The absence of any preference for localizing near the lipid headgroups of the bilayers indicates that the bioprotective effects of trehalose at physiologically relevant concentrations are the result of non-specific mechanisms that do not rely on direct interactions with the lipid headgroups.
“…In their experiments on the epimerisation of unprotected methyl glycopyranosides with Raney nickel, Koch and Stuart, [24,25] and later Perlin, [22] observed that thermodynamic equilibrium was not reached (i.e. the same composition of the product mixture was not reached starting from each of the components -indeed the same mixture was not seen starting from any two of the components tested), but it is noteworthy that significant α-GlcǞα-Gal and α-GlcǞα-Man epimerisation away from the α-glucoside was seen.…”
Aromaticity lost: In the presence of [{Ir(cod)Cl}2] and a binol‐derived phosphoramidite ligand, spirocyclohexadienone derivatives were obtained with up to 97 % ee through iridium‐catalyzed intramolecular asymmetric allylic dearomatization of phenols (see scheme; cod=cycloocta‐1,5‐diene).
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