Sickle cell disease (SCD) subjects exhibit subjective hypersensitivity to cold and heat perception in experimental settings, and triggers such as cold exposure are known to precipitate vaso-occlusive crisis by still unclear mechanisms. Decreased microvascular blood flow (MBF) increases the likelihood of vaso-occlusion by increasing entrapment of sickled red blood cells in the microvasculature. As SCD subjects have dysautonomia, we anticipated that thermal exposure would induce autonomic hypersensitivity of their microvasculature with an increased propensity towards vasoconstriction. We exposed 17 SCD and 16 control subjects to a sequence of predetermined threshold temperatures for cold and heat detection as well as cold and heat pain via a thermode placed on the right hand. MBF was measured on the contralateral hand using photo-plethysmography, and cardiac autonomic balance was assessed using heart rate variability. Thermal stimuli at both detection and pain thresholds caused significant decrease in MBF in the contralateral hand within seconds of stimulus application, with SCD subjects showing significantly stronger vasoconstriction (p=0.019). Furthermore, SCD subjects showed greater progressive decrease in blood flow than controls, with poor recovery between episodes of thermal stimulation (p=0.042). SCD subjects had faster vasoconstriction than controls (p=0.033), especially with cold detection stimulus; individuals with higher anxiety also vasoconstricted faster (p=0.007). Augmented vasoconstriction responses and progressive decrease in perfusion with repeated thermal stimulation in SCD is indicative of autonomic hypersensitivity in the microvasculature. This is likely to increase red cell entrapment in response to clinical triggers like cold or stress that have been associated with vaso-occlusive crisis in SCD.