A multi-cellular network of metabolically active E. coli as a weak gel of living Janus particles

Abstract

A multi-cellular network of metabolically active E. coli as a weak gel of living Janus particles Remigijus Šimkus, * a Romas Baronas b and Žilvinas Ledas b Bioluminescence images of nutrient rich liquid cultures of lux-gene reporter Escherichia coli were recorded for several hours after being placed into small diameter cylindrical containers (glass tubes and microtiter plate wells). It was found that luminous cells distribute near the three-phase contact line forming an irregular array of clumps, channels and plumes at the solid-liquid interface. The experimentally observed quasi-2-dimensional spatiotemporal patterns ('venation patterns') were simulated fairly well by the mean field Keller-Segel equations of chemotactic aggregation. The equations use a logistic cell growth term whose carrying capacity depends on oxygen concentration. The experimental and numerical results are interpreted as follows: (1) the patterns of bioluminescence form due to arrested phase separation in the culture; (2) the luminous phase formed along the upper part of the solid-liquid interface is a weak gel-like network of metabolically active bacteria which exhibit ligand-receptor type cell-cell adhesion and high rates of oxidative phosphorylation; (3) active bacteria in this gel can be viewed as self-generated Janus particles, i.e., polarized particles whose surface is divided into two chemically varying regions, the adhering region and the non-adhering region; (4) the life-time of the metabolically active bacterium (living Janus particle) in the weak gel phase is estimated to be $25 s; (5) the observed network of luminous bacteria can be viewed as a biofilm, in which bacteria move due to self-phoresis by generating pH gradients via metabolic reactions; and (6) the reversible clustering of cells near interfaces is attributed to the bacterial energy-taxis phenomenon.

Microtiter plate tests for segregation of bioluminescent bacteria

“…It has been recently shown that bioluminescence imaging can be employed to validate mathematical models of bacterial self‐organization. In particular, the abovementioned merging–emerging patterns were, to the best of our knowledge, for the first time observed experimentally in cylindrical samples of liquid cultures of bioluminescent Escherichia coli . The imagining showed luminous aggregates of bacteria merging and emerging along the three‐phase contact lines.…”

“…This is in line with the predictions of the KSF model. However, patterns of self‐organization are best captured with unexpected values of cell growth rate and diffusivity of chemoattractant . In an attempt to explain this, a phenomenological model of metabolic self‐organization was suggested in a paper by Šimkus and Baronas .…”

“…In an attempt to explain this, a phenomenological model of metabolic self‐organization was suggested in a paper by Šimkus and Baronas . It suggests that the metabolically active cells form a biofilm‐like network of active bacteria coined as a weak gel of living Janus particles .…”

Modelling of the normal elastic dissipative interaction of a S. Aureus Bacterium

“…The diameter of the bacterium is d = 1 m, while the density is i = 1.415 g/cm 3 , [13]. The density of the glass surface is j = 2.470 g/cm 3 . During the interaction of the bacterium and the glass surface, the bacterium is surrounded by water.…”

“…Different approaches can be applied for the simulation of bacteria motion. The diffusion and chemotaxis of bacterial cells are processes playing a fundamental role for active suspension behaviour and biofilm formation [3]. Using particle interpretation for a description of bacterium interaction, the Discrete Element Method (DEM) can be taken into account.…”