Protein synthesis takes place predominantly in the cytoplasm, meaning that proteins that are needed in the nuclear compartment, such as those that control gene transcription, have to be transported from the cytoplasm to the nucleus. Analysis of the regulation of nuclear import, which is central to cell responses to signalling pathways, and stress responses such as viral infection, requires dynamic experimental systems able to provide quantitative kinetic information. This article describes an
in vitro
reconstituted system as well as quantitative live cell imaging approaches, including the technique of fluorescence recovery after photobleaching, that enable the rate and extent of nuclear import to be quantitatively determined, and assist mechanistic studies with respect to the nuclear transporters and targeting signals involved. This is critical to a full understanding of the importance of nuclear trafficking in biological systems.
Key Concepts:
The regulation of nuclear transport is critical to transcriptional control in response to cellular and developmental signals, viral infection, etc.
Using quantitative confocal laser scanning microscopy (CLSM) can enable small changes in nuclear localisation to be identified.
Systems to reconstitute nuclear transport
in vitro
can enable the delineation of nuclear transport mechanisms.
The technique of fluorescence recovery after photobleaching can be used to determine nuclear transport kinetics in the living cell.
Quantitative techniques to examine nuclear transport allow for sequences and mechanisms underpinning regulated nucleocytoplasmic protein transport to be dissected.